- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : Radical SAM [Interproscan].
Gene families : OG_01_0000198 (OrthoFinder) Phylogenetic Tree(s): OG0000198_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: EOD39311 | |
| Cluster | HCCA: Cluster_226 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre05.g238500 | 30783033 | No description available | 0.03 | OrthoFinder | |
| Cz06g22280.t1 | No alias | Radical SAM [Interproscan]. | 0.01 | OrthoFinder | |
| Sro288_g108800.1 | Contig62.g500 | RNA methyltransferase RlmN | 0.02 | OrthoFinder | |
| XM_002502135.1 | MICPUN_82264, 82264 | Radical SAM [Interproscan]. | 0.01 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003824 | catalytic activity | IEA | Interproscan |
| MF | GO:0051536 | iron-sulfur cluster binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific | IEP | Enrichment |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Enrichment |
| MF | GO:0004806 | triglyceride lipase activity | IEP | Enrichment |
| MF | GO:0005215 | transporter activity | IEP | Enrichment |
| MF | GO:0005315 | inorganic phosphate transmembrane transporter activity | IEP | Enrichment |
| CC | GO:0005575 | cellular_component | IEP | Enrichment |
| BP | GO:0006810 | transport | IEP | Enrichment |
| BP | GO:0006817 | phosphate ion transport | IEP | Enrichment |
| BP | GO:0006820 | anion transport | IEP | Enrichment |
| BP | GO:0008150 | biological_process | IEP | Enrichment |
| MF | GO:0015291 | secondary active transmembrane transporter activity | IEP | Enrichment |
| BP | GO:0015698 | inorganic anion transport | IEP | Enrichment |
| MF | GO:0016298 | lipase activity | IEP | Enrichment |
| CC | GO:0018995 | host cellular component | IEP | Enrichment |
| BP | GO:0019748 | secondary metabolic process | IEP | Enrichment |
| MF | GO:0022857 | transmembrane transporter activity | IEP | Enrichment |
| BP | GO:0030638 | polyketide metabolic process | IEP | Enrichment |
| CC | GO:0033643 | host cell part | IEP | Enrichment |
| CC | GO:0033646 | host intracellular part | IEP | Enrichment |
| CC | GO:0033647 | host intracellular organelle | IEP | Enrichment |
| CC | GO:0033648 | host intracellular membrane-bounded organelle | IEP | Enrichment |
| CC | GO:0042025 | host cell nucleus | IEP | Enrichment |
| MF | GO:0043167 | ion binding | IEP | Enrichment |
| BP | GO:0051179 | localization | IEP | Enrichment |
| BP | GO:0051234 | establishment of localization | IEP | Enrichment |
| MF | GO:0052689 | carboxylic ester hydrolase activity | IEP | Enrichment |
| BP | GO:0055085 | transmembrane transport | IEP | Enrichment |
| MF | GO:0071949 | FAD binding | IEP | Enrichment |
| CC | GO:0110165 | cellular anatomical entity | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR007197 | rSAM | 129 | 199 |
| No external refs found! |