EOD39000

Description : Mechanosensitive ion channel MscS [Interproscan].

Gene families : OG_01_0000544 (OrthoFinder) Phylogenetic Tree(s): OG0000544_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: EOD39000
Cluster	HCCA: Cluster_188

Target	Alias	Description	ECC score	Gene Family Method
SymbC1.scaffold11349.1	11349.1	Mechanosensitive ion channel MscS [Interproscan].	0.01	OrthoFinder
SymbC1.scaffold2641.1	2641.1	Mechanosensitive ion channel MscS [Interproscan].	0.02	OrthoFinder
lcl\|LHPG02000003.1_cds_PRW59990.1_6482	PRW59990	Small conductance mechanosensitive ion channel family	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004176	ATP-dependent peptidase activity	IEP	Enrichment
MF	GO:0004252	serine-type endopeptidase activity	IEP	Enrichment
MF	GO:0009055	electron transfer activity	IEP	Enrichment
MF	GO:0016491	oxidoreductase activity	IEP	Enrichment
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	Enrichment
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	Enrichment
MF	GO:0051536	iron-sulfur cluster binding	IEP	Enrichment
MF	GO:0051540	metal cluster binding	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR006685	MscS_channel	5	213

External Links

No external refs found!