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  5. Cpa|evm.model.tig00021221.7

Cpa|evm.model.tig00021221.7 (tig00021221_g19348.t1)


Aliases : tig00021221_g19348.t1

Description : RNA biosynthesis.RNA polymerase III-dependent transcription.TFIIIe transcription factor complex.RPC82 component


Gene families : OG_01_0001989 (OrthoFinder) Phylogenetic Tree(s): OG0001989_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021221.7
Cluster HCCA: Cluster_204

Target Alias Description ECC score Gene Family Method Actions
Cre16.g673900 30777741 RNA biosynthesis.RNA polymerase III-dependent... 0.03 OrthoFinder
Vocar.0018s0038.1 32898566 RNA polymerase III Rpc82, C -terminal; RNA polymerase... 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP Enrichment
CC GO:0000124 SAGA complex IEP Enrichment
MF GO:0003712 transcription coregulator activity IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003872 6-phosphofructokinase activity IEP Enrichment
MF GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity IEP Enrichment
MF GO:0004749 ribose phosphate diphosphokinase activity IEP Enrichment
MF GO:0005375 copper ion transmembrane transporter activity IEP Enrichment
BP GO:0006091 generation of precursor metabolites and energy IEP Enrichment
BP GO:0006098 pentose-phosphate shunt IEP Enrichment
BP GO:0006353 DNA-templated transcription, termination IEP Enrichment
BP GO:0006739 NADP metabolic process IEP Enrichment
BP GO:0006740 NADPH regeneration IEP Enrichment
MF GO:0008443 phosphofructokinase activity IEP Enrichment
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016778 diphosphotransferase activity IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Enrichment
MF GO:0019200 carbohydrate kinase activity IEP Enrichment
CC GO:0031248 protein acetyltransferase complex IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Enrichment
BP GO:0051156 glucose 6-phosphate metabolic process IEP Enrichment
MF GO:0051287 NAD binding IEP Enrichment
MF GO:0070403 NAD+ binding IEP Enrichment
CC GO:0070461 SAGA-type complex IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
CC GO:1902493 acetyltransferase complex IEP Enrichment
CC GO:1905368 peptidase complex IEP Enrichment
CC GO:1990234 transferase complex IEP Enrichment
InterPro domains Description Start Stop
IPR008806 RNA_pol_III_Rpc82_C 254 370
IPR013197 RNA_pol_III_RPC82-rel_HTH 9 66
No external refs found!