1. Home
  2. Species
  3. Emiliania huxleyi
  4. Sequence
  5. EOD38452

EOD38452


Description : Helicase, C-terminal; SNF2-related, N-terminal domain [Interproscan].


Gene families : OG_01_0000017 (OrthoFinder) Phylogenetic Tree(s): OG0000017_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD38452
Cluster HCCA: Cluster_285

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000217.25 tig00000217_g19158.t1 Chromatin structure-remodeling complex protein SYD... 0.02 OrthoFinder
Cpa|evm.model.tig00000802.67 tig00000802_g4315.t2 Probable ATP-dependent DNA helicase CHR12 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cpa|evm.model.tig00000983.26 tig00000983_g5915.t1 RNA biosynthesis.RNA polymerase II-dependent... 0.03 OrthoFinder
Cpa|evm.model.tig00020960.24 tig00020960_g16545.t1 Protein CHROMATIN REMODELING 5 OS=Arabidopsis thaliana 0.01 OrthoFinder
Cpa|evm.model.tig00021623.13 tig00021623_g23013.t1 RNA biosynthesis.transcriptional activation.PHD finger... 0.01 OrthoFinder
Cz03g32130.t1 No alias SNF2-related, N-terminal domain; Helicase, C-terminal... 0.02 OrthoFinder
Cz19g07040.t1 No alias Helicase, C-terminal; SNF2-related, N-terminal domain;... 0.02 OrthoFinder
Dusal.0024s00040.1 33202173 SNF2-related, N-terminal domain [Interproscan]. 0.03 OrthoFinder
Dusal.0280s00012.1 33203409 SNF2-related, N-terminal domain [Interproscan]. 0.01 OrthoFinder
EOD04122 No alias Helicase, C-terminal; Zinc finger, PHD-finger;... 0.03 OrthoFinder
EOD27153 No alias Helicase, C-terminal; SNF2-related, N-terminal domain... 0.03 OrthoFinder
PTI_10G00070.1 No alias Helicase, C-terminal; High mobility group box domain;... 0.03 OrthoFinder
Sro19_g013190.1 Contig446.g5983 CHD3-type chromatin-remodeling factor 0.03 OrthoFinder
Sro272_g104840.1 Contig2144.g18025 Chromodomain-helicase-DNA-binding protein 0.03 OrthoFinder
Sro29_g019150.1 Contig1384.g12758 CHD3-type chromatin-remodeling factor CHR7 0.02 OrthoFinder
Sro2_g001340.1 Contig467.g6292 CHD3-type chromatin-remodeling factor PICKLE 0.03 OrthoFinder
Sro358_g125960.1 Contig1210.g11383 Probable chromatin-remodeling complex ATPase chain 0.03 OrthoFinder
Sro566_g167850.1 Contig3739.g28680 ISWI chromatin-remodeling complex ATPase ISW2 0.03 OrthoFinder
TP11G02170.1 No alias SNF2-related, N-terminal domain; Chromo domain;... 0.02 OrthoFinder
XM_003055229.1 MicpuC2_12258, 12258 Helicase, C-terminal; SNF2-related, N-terminal domain... 0.02 OrthoFinder
lcl|BLLF01003574.1_cds_GFH27683.1_22160 HaLaN_26047, GFH27683 SNF2-related, N-terminal domain [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004363 glutathione synthase activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
BP GO:0005984 disaccharide metabolic process IEP Enrichment
BP GO:0005991 trehalose metabolic process IEP Enrichment
BP GO:0005992 trehalose biosynthetic process IEP Enrichment
BP GO:0006575 cellular modified amino acid metabolic process IEP Enrichment
BP GO:0006749 glutathione metabolic process IEP Enrichment
BP GO:0006750 glutathione biosynthetic process IEP Enrichment
BP GO:0006790 sulfur compound metabolic process IEP Enrichment
BP GO:0009311 oligosaccharide metabolic process IEP Enrichment
BP GO:0009312 oligosaccharide biosynthetic process IEP Enrichment
BP GO:0009966 regulation of signal transduction IEP Enrichment
BP GO:0010646 regulation of cell communication IEP Enrichment
BP GO:0016051 carbohydrate biosynthetic process IEP Enrichment
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Enrichment
MF GO:0016881 acid-amino acid ligase activity IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
BP GO:0019184 nonribosomal peptide biosynthetic process IEP Enrichment
BP GO:0023051 regulation of signaling IEP Enrichment
MF GO:0030246 carbohydrate binding IEP Enrichment
MF GO:0030247 polysaccharide binding IEP Enrichment
BP GO:0032012 regulation of ARF protein signal transduction IEP Enrichment
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Enrichment
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Enrichment
BP GO:0044262 cellular carbohydrate metabolic process IEP Enrichment
BP GO:0044272 sulfur compound biosynthetic process IEP Enrichment
BP GO:0046351 disaccharide biosynthetic process IEP Enrichment
BP GO:0046578 regulation of Ras protein signal transduction IEP Enrichment
BP GO:0048583 regulation of response to stimulus IEP Enrichment
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Enrichment
BP GO:1902531 regulation of intracellular signal transduction IEP Enrichment
MF GO:2001070 starch binding IEP Enrichment
InterPro domains Description Start Stop
IPR001650 Helicase_C 437 544
IPR000330 SNF2_N 151 430
No external refs found!