1. Home
  2. Species
  3. Cyanophora paradoxa
  4. Sequence
  5. Cpa|evm.model.tig00021181.5

Cpa|evm.model.tig00021181.5 (tig00021181_g19309.t1)


Aliases : tig00021181_g19309.t1

Description : Vesicle trafficking.clathrin coated vesicle (CCV) machinery.AP-1 trans-Golgi network cargo adaptor complex.AP1M medium mu subunit


Gene families : OG_01_0000738 (OrthoFinder) Phylogenetic Tree(s): OG0000738_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021181.5
Cluster HCCA: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
Cre06.g262250 30779227, AP1M1 Vesicle trafficking.clathrin coated vesicle (CCV)... 0.06 OrthoFinder
Cz02g16120.t1 No alias Mu homology domain [Interproscan]. 0.02 OrthoFinder
Cz13g06130.t1 No alias AP complex, mu/sigma subunit [Interproscan]. 0.01 OrthoFinder
EOD10147 No alias Apm2, medium subunit of the adaptin 2 complex [Ensembl]. 0.02 OrthoFinder
EOD24729 No alias Apm2, medium subunit of the adaptin 2 complex [Ensembl]. 0.02 OrthoFinder
EOD33288 No alias Adaptor protein 1 medium subunit [Ensembl]. 0.01 OrthoFinder
EOD33289 No alias Adaptor protein 1 medium subunit [Ensembl]. 0.01 OrthoFinder
TP14G03430.1 No alias AP complex, mu/sigma subunit; Mu homology domain [Interproscan]. 0.02 OrthoFinder
Transcript_contig_54314 54314 AP complex, mu/sigma subunit; Mu homology domain [Interproscan]. 0.01 OrthoFinder
Transcript_contig_55081 55081 AP complex, mu/sigma subunit; Mu homology domain [Interproscan]. 0.01 OrthoFinder
Vocar.0052s0018.1 32897683 AP complex, mu/sigma subunit; Mu homology domain [Interproscan]. 0.02 OrthoFinder
XM_002500455.1 MICPUN_52211, 52211 AP complex, mu/sigma subunit; Mu homology domain [Interproscan]. 0.02 OrthoFinder
XM_003063463.1 MicpuC2_29751, 29751 Mu homology domain; AP complex, mu/sigma subunit [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01000081.1_cds_GFH07212.1_1689 HaLaN_01982, GFH07212 MHD domain-containing protein 0.01 OrthoFinder
lcl|BLLF01002790.1_cds_GFH25350.1_19827 HaLaN_23295, GFH25350 MHD domain-containing protein 0.02 OrthoFinder
lcl|LHPG02000006.1_cds_PRW57884.1_8711 PRW57884 AP-2 complex subunit mu 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Enrichment
MF GO:0000166 nucleotide binding IEP Enrichment
CC GO:0000502 proteasome complex IEP Enrichment
MF GO:0003689 DNA clamp loader activity IEP Enrichment
MF GO:0003747 translation release factor activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004357 glutamate-cysteine ligase activity IEP Enrichment
MF GO:0004402 histone acetyltransferase activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0004784 superoxide dismutase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005643 nuclear pore IEP Enrichment
CC GO:0005663 DNA replication factor C complex IEP Enrichment
CC GO:0005801 cis-Golgi network IEP Enrichment
BP GO:0006415 translational termination IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0006605 protein targeting IEP Enrichment
BP GO:0006612 protein targeting to membrane IEP Enrichment
BP GO:0006613 cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006801 superoxide metabolic process IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP Enrichment
BP GO:0006897 endocytosis IEP Enrichment
MF GO:0008079 translation termination factor activity IEP Enrichment
MF GO:0008080 N-acetyltransferase activity IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
MF GO:0008312 7S RNA binding IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
MF GO:0016407 acetyltransferase activity IEP Enrichment
MF GO:0016410 N-acyltransferase activity IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
BP GO:0016567 protein ubiquitination IEP Enrichment
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0016881 acid-amino acid ligase activity IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
BP GO:0022411 cellular component disassembly IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
CC GO:0030120 vesicle coat IEP Enrichment
CC GO:0030126 COPI vesicle coat IEP Enrichment
CC GO:0030127 COPII vesicle coat IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
BP GO:0032446 protein modification by small protein conjugation IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0032984 protein-containing complex disassembly IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
BP GO:0033365 protein localization to organelle IEP Enrichment
MF GO:0034212 peptide N-acetyltransferase activity IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043624 cellular protein complex disassembly IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
BP GO:0045047 protein targeting to ER IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
BP GO:0048193 Golgi vesicle transport IEP Enrichment
CC GO:0048500 signal recognition particle IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
BP GO:0051668 localization within membrane IEP Enrichment
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Enrichment
BP GO:0070972 protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
BP GO:0072593 reactive oxygen species metabolic process IEP Enrichment
BP GO:0072594 establishment of protein localization to organelle IEP Enrichment
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0072657 protein localization to membrane IEP Enrichment
BP GO:0090150 establishment of protein localization to membrane IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1905368 peptidase complex IEP Enrichment
CC GO:1905369 endopeptidase complex IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR029260 DSPn 10 53
IPR029260 DSPn 54 120
IPR022775 AP_mu_sigma_su 355 480
IPR028565 MHD 507 774
IPR000340 Dual-sp_phosphatase_cat-dom 228 294
No external refs found!