1. Home
  2. Species
  3. Emiliania huxleyi
  4. Sequence
  5. EOD37797

EOD37797


Description : Putative 5-3 exonuclease; Xrn1, helical domain [Interproscan].


Gene families : OG_01_0000264 (OrthoFinder) Phylogenetic Tree(s): OG0000264_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD37797
Cluster HCCA: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
PTI_04G04230.1 No alias Putative 5-3 exonuclease; Xrn1, helical domain [Interproscan]. 0.03 OrthoFinder
Transcript_contig_54005 54005 Putative 5-3 exonuclease; Xrn1, helical domain [Interproscan]. 0.02 OrthoFinder
Vocar.0018s0127.1 32898571 Putative 5-3 exonuclease; Xrn1, helical domain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0004527 exonuclease activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003887 DNA-directed DNA polymerase activity IEP Enrichment
MF GO:0003909 DNA ligase activity IEP Enrichment
MF GO:0003910 DNA ligase (ATP) activity IEP Enrichment
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP Enrichment
MF GO:0004177 aminopeptidase activity IEP Enrichment
MF GO:0004185 serine-type carboxypeptidase activity IEP Enrichment
MF GO:0004497 monooxygenase activity IEP Enrichment
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0006310 DNA recombination IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
MF GO:0008131 primary amine oxidase activity IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008236 serine-type peptidase activity IEP Enrichment
MF GO:0008238 exopeptidase activity IEP Enrichment
MF GO:0008239 dipeptidyl-peptidase activity IEP Enrichment
BP GO:0009308 amine metabolic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Enrichment
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Enrichment
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0017171 serine hydrolase activity IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0034061 DNA polymerase activity IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043015 gamma-tubulin binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
MF GO:0048038 quinone binding IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
MF GO:0070008 serine-type exopeptidase activity IEP Enrichment
MF GO:0070009 serine-type aminopeptidase activity IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR041412 Xrn1_helical 378 572
IPR004859 Put_53exo 25 234
No external refs found!