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  5. Cpa|evm.model.tig00021179.32

Cpa|evm.model.tig00021179.32 (tig00021179_g19247.t1)


Aliases : tig00021179_g19247.t1

Description : Katanin p60 ATPase-containing subunit A1 OS=Arabidopsis thaliana


Gene families : OG_01_0000074 (OrthoFinder) Phylogenetic Tree(s): OG0000074_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021179.32
Cluster HCCA: Cluster_190

Target Alias Description ECC score Gene Family Method Actions
Cre12.g541300 30792645 Katanin p60 ATPase-containing subunit A1 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cre16.g650151 30777740 Enzyme classification.EC_3 hydrolases.EC_3.6 hydrolase... 0.02 OrthoFinder
Cz09g21110.t1 No alias AAA ATPase, AAA+ lid domain; ATPase, AAA-type, core... 0.02 OrthoFinder
Cz16g13090.t1 No alias ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain... 0.02 OrthoFinder
Dusal.0027s00019.1 33191576 ATPase, AAA-type, core [Interproscan]. 0.02 OrthoFinder
EOD34990 No alias ATPase family, AAA domain containing [Ensembl]. 0.02 OrthoFinder
PTI_27G00180.1 No alias AAA ATPase, AAA+ lid domain; MIT; ATPase, AAA-type,... 0.01 OrthoFinder
Sro566_g167770.1 Contig3739.g28672 Fidgetin-like protein 1 0.03 OrthoFinder
Transcript_contig_59114 59114 ATPase, AAA-type, core [Interproscan]. 0.01 OrthoFinder
Vocar.0032s0138.1 32893709 ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain... 0.02 OrthoFinder
Vocar.0041s0001.1 32888711 ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain... 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004180 carboxypeptidase activity IEP Enrichment
MF GO:0004185 serine-type carboxypeptidase activity IEP Enrichment
MF GO:0004252 serine-type endopeptidase activity IEP Enrichment
MF GO:0004609 phosphatidylserine decarboxylase activity IEP Enrichment
MF GO:0004842 ubiquitin-protein transferase activity IEP Enrichment
MF GO:0005506 iron ion binding IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008236 serine-type peptidase activity IEP Enrichment
MF GO:0008238 exopeptidase activity IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016831 carboxy-lyase activity IEP Enrichment
MF GO:0017171 serine hydrolase activity IEP Enrichment
MF GO:0019787 ubiquitin-like protein transferase activity IEP Enrichment
MF GO:0020037 heme binding IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
MF GO:0070008 serine-type exopeptidase activity IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
InterPro domains Description Start Stop
IPR041569 AAA_lid_3 440 472
IPR003959 ATPase_AAA_core 288 417
No external refs found!