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  5. EOD37191

EOD37191


Description : Chaperonin Cpn60/TCP-1 family [Interproscan].


Gene families : OG_01_0002693 (OrthoFinder) Phylogenetic Tree(s): OG0002693_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD37191
Cluster HCCA: Cluster_155

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000157.20 tig00000157_g9607.t1 Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.1 OrthoFinder
Cre03.g168450 30788210, CCT8 Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.12 OrthoFinder
Cz01g25210.t1 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.04 OrthoFinder
Cz01g25220.t1 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.1 OrthoFinder
Dusal.0656s00001.1 33192410 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.02 OrthoFinder
OT_03G03560.1 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.05 OrthoFinder
Sro163_g073140.1 Contig1793.g15847 Complex protein 1 subunit theta 0.11 OrthoFinder
TP06G04660.1 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.05 OrthoFinder
Transcript_contig_54448 54448 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.03 OrthoFinder
Vocar.0040s0089.1 32886233 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.05 OrthoFinder
XM_002499420.1 MICPUN_104761, 104761 TCP-1/cpn60 chaperonin family protein (TCP-1) 0.1 OrthoFinder
XM_003055695.1 MicpuC2_31125, 31125 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000604.1_cds_GFH13366.1_7843 HaLaN_09237, GFH13366 Chaperonin complex component 0.06 OrthoFinder
lcl|BLLF01000604.1_cds_GFH13367.1_7844 HaLaN_09238, GFH13367 Chaperonin complex component 0.04 OrthoFinder
lcl|LHPG02000008.1_cds_PRW56475.1_9784 PRW56475 T-complex 1 subunit theta 0.03 OrthoFinder
lcl|VRMN01000011.1_cds_KAA8491814.1_4822 KAA8491814 T-complex protein 1 subunit theta 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003909 DNA ligase activity IEP Enrichment
MF GO:0003910 DNA ligase (ATP) activity IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004252 serine-type endopeptidase activity IEP Enrichment
MF GO:0004559 alpha-mannosidase activity IEP Enrichment
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
CC GO:0005783 endoplasmic reticulum IEP Enrichment
BP GO:0006310 DNA recombination IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008236 serine-type peptidase activity IEP Enrichment
MF GO:0008238 exopeptidase activity IEP Enrichment
MF GO:0008483 transaminase activity IEP Enrichment
MF GO:0015923 mannosidase activity IEP Enrichment
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Enrichment
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Enrichment
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Enrichment
MF GO:0017171 serine hydrolase activity IEP Enrichment
MF GO:0030246 carbohydrate binding IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
MF GO:0070008 serine-type exopeptidase activity IEP Enrichment
InterPro domains Description Start Stop
IPR002423 Cpn60/TCP-1 40 121
IPR002423 Cpn60/TCP-1 143 405
No external refs found!