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  5. Cpa|evm.model.tig00000025.1

Cpa|evm.model.tig00000025.1 (tig00000025_g7909.t2)


Aliases : tig00000025_g7909.t2

Description : Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCB transporter


Gene families : OG_01_0000036 (OrthoFinder) Phylogenetic Tree(s): OG0000036_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000025.1
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
Dusal.1095s00001.1 33197946 ABC transporter-like; ABC transporter type 1,... 0.02 OrthoFinder
EOD33358 No alias Putative ABC transporter [Ensembl]. 0.02 OrthoFinder
Sro232_g093950.1 Contig4063.g31160 Leptomycin B resistance protein pmd1 0.01 OrthoFinder
Transcript_contig_54804 54804 ABC transporter type 1, transmembrane domain; ABC... 0.01 OrthoFinder
XM_002505231.1 MICPUN_75054, 75054 ATP-binding cassette superfamily 0.02 OrthoFinder
lcl|BLLF01000498.1_cds_GFH12387.1_6864 HaLaN_08064, GFH12387 ATP-binding cassette, subfamily B(MDR/TAP), member 1 0.02 OrthoFinder
lcl|BLLF01000605.1_cds_GFH13375.1_7852 HaLaN_09249, GFH13375 ABC transporter type 1, transmembrane domain; ABC... 0.03 OrthoFinder
lcl|BLLF01002502.1_cds_GFH24318.1_18795 HaLaN_22091, GFH24318 ATP-binding cassette transporter 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Enrichment
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0004673 protein histidine kinase activity IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Enrichment
MF GO:0140299 small molecule sensor activity IEP Enrichment
InterPro domains Description Start Stop
IPR011527 ABC1_TM_dom 14 198
IPR011527 ABC1_TM_dom 694 768
IPR003439 ABC_transporter-like_ATP-bd 287 439
No external refs found!