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  5. EOD35975

EOD35975


Description : GNAT domain; Radical SAM, C-terminal extension; Radical SAM [Interproscan].


Gene families : OG_01_0002488 (OrthoFinder) Phylogenetic Tree(s): OG0002488_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD35975
Cluster HCCA: Cluster_281

Target Alias Description ECC score Gene Family Method Actions
OT_15G00460.1 No alias GNAT domain; Radical SAM, C-terminal extension; Radical... 0.02 OrthoFinder
lcl|LHPG02000013.1_cds_PRW44611.1_2434 PRW44611 Elongator complex 3 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0008080 N-acetyltransferase activity IEA Interproscan
MF GO:0051536 iron-sulfur cluster binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP Enrichment
MF GO:0004399 histidinol dehydrogenase activity IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006547 histidine metabolic process IEP Enrichment
BP GO:0008652 cellular amino acid biosynthetic process IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0016053 organic acid biosynthetic process IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
BP GO:0016579 protein deubiquitination IEP Enrichment
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Enrichment
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
BP GO:0032259 methylation IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
BP GO:0044283 small molecule biosynthetic process IEP Enrichment
BP GO:0046394 carboxylic acid biosynthetic process IEP Enrichment
MF GO:0051287 NAD binding IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:0070646 protein modification by small protein removal IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR007197 rSAM 154 343
IPR000182 GNAT_dom 479 595
IPR032432 Radical_SAM_C 363 442
No external refs found!