Cpa|evm.model.tig00021133.10 (tig00021133_g18909.t1)


Aliases : tig00021133_g18909.t1

Description : RNA processing.ribonuclease activities.RNase Z endoribonuclease


Gene families : OG_01_0000593 (OrthoFinder) Phylogenetic Tree(s): OG0000593_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021133.10
Cluster HCCA: Cluster_199

Target Alias Description ECC score Gene Family Method Actions
Cz06g11030.t1 No alias Metallo-beta-lactamase [Interproscan]. 0.03 OrthoFinder
Cz13g15250.t1 No alias Hypothetical protein 0.02 OrthoFinder
Dusal.0160s00009.1 33188331 Metallo-beta-lactamase [Interproscan]. 0.05 OrthoFinder
EOD41291 No alias Zinc phosphodiesterase [Ensembl]. 0.02 OrthoFinder
OT_16G01360.1 No alias Metallo-beta-lactamase [Interproscan]. 0.03 OrthoFinder
PTI_12G02510.1 No alias tRNase Z endonuclease; Metallo-beta-lactamase [Interproscan]. 0.01 OrthoFinder
Vocar.0001s0798.1 32885954 tRNase Z endonuclease; Metallo-beta-lactamase [Interproscan]. 0.02 OrthoFinder
XM_003064000.1 MicpuC2_54013, 54013 tRNase Z endonuclease [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000012.1_cds_PRW45195.1_1678 PRW45195 Zinc phosphodiesterase ELAC 2-like isoform X2 0.01 OrthoFinder
lcl|LHPG02000026.1_cds_PRW18410.1_5879 PRW18410 Zinc phosphodiesterase ELAC 2 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Enrichment
MF GO:0000166 nucleotide binding IEP Enrichment
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Enrichment
BP GO:0000959 mitochondrial RNA metabolic process IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005730 nucleolus IEP Enrichment
CC GO:0005739 mitochondrion IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
MF GO:0008134 transcription factor binding IEP Enrichment
BP GO:0008652 cellular amino acid biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Enrichment
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Enrichment
BP GO:0030490 maturation of SSU-rRNA IEP Enrichment
CC GO:0031090 organelle membrane IEP Enrichment
CC GO:0031965 nuclear membrane IEP Enrichment
MF GO:0033218 amide binding IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
MF GO:0051287 NAD binding IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:0120227 acyl-CoA binding IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
MF GO:1901567 fatty acid derivative binding IEP Enrichment
MF GO:1901681 sulfur compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR027794 tRNase_Z_dom 9 62
No external refs found!