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  5. EOD34220

EOD34220


Description : Zinc finger, PHD-finger; Zinc finger, CXXC-type [Interproscan].


Gene families : OG_01_0000700 (OrthoFinder) Phylogenetic Tree(s): OG0000700_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD34220
Cluster HCCA: Cluster_226

Target Alias Description ECC score Gene Family Method Actions
Cre08.g380151 30774050 No description available 0.01 OrthoFinder
Dusal.0759s00003.1 33194751 Hypothetical protein 0.02 OrthoFinder
OT_04G01830.1 No alias Zinc finger, PHD-finger [Interproscan]. 0.02 OrthoFinder
Vocar.0042s0028.1 32892021 FY-rich, C-terminal; Zinc finger, PHD-finger; Methyl-CpG... 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP Enrichment
MF GO:0004000 adenosine deaminase activity IEP Enrichment
CC GO:0005777 peroxisome IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
BP GO:0007031 peroxisome organization IEP Enrichment
BP GO:0008064 regulation of actin polymerization or depolymerization IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
BP GO:0009166 nucleotide catabolic process IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
MF GO:0019239 deaminase activity IEP Enrichment
BP GO:0019439 aromatic compound catabolic process IEP Enrichment
CC GO:0030120 vesicle coat IEP Enrichment
CC GO:0030127 COPII vesicle coat IEP Enrichment
BP GO:0030832 regulation of actin filament length IEP Enrichment
BP GO:0030833 regulation of actin filament polymerization IEP Enrichment
BP GO:0032271 regulation of protein polymerization IEP Enrichment
BP GO:0032535 regulation of cellular component size IEP Enrichment
BP GO:0032956 regulation of actin cytoskeleton organization IEP Enrichment
BP GO:0032970 regulation of actin filament-based process IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
BP GO:0033043 regulation of organelle organization IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
BP GO:0034404 nucleobase-containing small molecule biosynthetic process IEP Enrichment
BP GO:0034655 nucleobase-containing compound catabolic process IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
CC GO:0042579 microbody IEP Enrichment
BP GO:0043254 regulation of protein-containing complex assembly IEP Enrichment
BP GO:0044087 regulation of cellular component biogenesis IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
BP GO:0051128 regulation of cellular component organization IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0051493 regulation of cytoskeleton organization IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
BP GO:0090066 regulation of anatomical structure size IEP Enrichment
BP GO:0110053 regulation of actin filament organization IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
BP GO:1901292 nucleoside phosphate catabolic process IEP Enrichment
BP GO:1902903 regulation of supramolecular fiber organization IEP Enrichment
InterPro domains Description Start Stop
IPR019787 Znf_PHD-finger 236 286
IPR002857 Znf_CXXC 281 313
No external refs found!