Cpa|evm.model.tig00021127.70 (tig00021127_g18747.t1)

Aliases : tig00021127_g18747.t1

Description : ABC transporter B family member 25 OS=Oryza sativa subsp. japonica

Gene families : OG_01_0000036 (OrthoFinder) Phylogenetic Tree(s): OG0000036_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021127.70
Cluster HCCA: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
Cz07g17170.t1 No alias ABC transporter type 1, transmembrane domain; ABC... 0.02 OrthoFinder
Dusal.0274s00010.1 33185624 ABC transporter type 1, transmembrane domain [Interproscan]. 0.01 OrthoFinder
Sro1234_g254930.1 Contig2459.g20128 Probable microcin-H47 secretion/processing ATP-binding... 0.01 OrthoFinder
Sro157_g071300.1 Contig2362.g19420 Lactococcin transport/processing ATP-binding protein LcnC-like 0.02 OrthoFinder
Sro1631_g287230.1 Contig2461.g20146 Leptomycin B resistance protein pmd1 0.01 OrthoFinder
TP12G00540.1 No alias ABC transporter-like; ABC transporter type 1,... 0.02 OrthoFinder
XM_002502028.1 MICPUN_58471, 58471 ATP-binding cassette superfamily 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Enrichment
MF GO:0004112 cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
BP GO:0006643 membrane lipid metabolic process IEP Enrichment
BP GO:0006664 glycolipid metabolic process IEP Enrichment
BP GO:0006887 exocytosis IEP Enrichment
MF GO:0008081 phosphoric diester hydrolase activity IEP Enrichment
MF GO:0008171 O-methyltransferase activity IEP Enrichment
BP GO:0009247 glycolipid biosynthetic process IEP Enrichment
BP GO:0032940 secretion by cell IEP Enrichment
MF GO:0042578 phosphoric ester hydrolase activity IEP Enrichment
BP GO:0046467 membrane lipid biosynthetic process IEP Enrichment
BP GO:0046903 secretion IEP Enrichment
MF GO:0070008 serine-type exopeptidase activity IEP Enrichment
CC GO:0099023 vesicle tethering complex IEP Enrichment
BP GO:0140352 export from cell IEP Enrichment
BP GO:1903509 liposaccharide metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 565 652
IPR011527 ABC1_TM_dom 165 437
No external refs found!