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  5. EOD33894

EOD33894


Description : Replication factor A, C-terminal; Replication protein A, OB domain [Interproscan].


Gene families : OG_01_0000974 (OrthoFinder) Phylogenetic Tree(s): OG0000974_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD33894
Cluster HCCA: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000823.18 tig00000823_g4546.t1 Replication protein A 70 kDa DNA-binding subunit E... 0.02 OrthoFinder
Cre16.g651000 30777595 Cell cycle.mitosis and meiosis.meiotic recombination.DNA... 0.02 OrthoFinder
Cre17.g718850 30781874 Cell cycle.mitosis and meiosis.meiotic recombination.DNA... 0.02 OrthoFinder
Cz03g15270.t1 No alias Replication factor A, C-terminal; Replication factor-A... 0.04 OrthoFinder
Cz16g10020.t1 No alias Replication protein A, OB domain; Domain of unknown... 0.03 OrthoFinder
Dusal.0522s00008.1 33190764 Replication protein A, OB domain; Replication factor A,... 0.02 OrthoFinder
EOD40586 No alias Replication factor-A protein 1, N-terminal; Replication... 0.03 OrthoFinder
OT_15G01170.1 No alias Replication factor-A protein 1, N-terminal; Zinc finger,... 0.05 OrthoFinder
OT_18G01480.1 No alias Replication factor A, C-terminal; Replication protein A,... 0.04 OrthoFinder
Transcript_contig_79125 79125 Replication factor A, C-terminal [Interproscan]. 0.01 OrthoFinder
Vocar.0032s0065.1 32893746 Replication factor A, C-terminal; Domain of unknown... 0.02 OrthoFinder
XM_002501123.1 MICPUN_57417, 57417 Replication factor A, C-terminal; OB-fold nucleic acid... 0.05 OrthoFinder
XM_003064552.1 MicpuC2_54461, 54461 Replication protein A, OB domain; Replication factor A,... 0.02 OrthoFinder
lcl|LHPG02000004.1_cds_PRW59082.1_7003 PRW59082 Replication A 70 kDa DNA-binding subunit A-like 0.02 OrthoFinder
lcl|LHPG02000022.1_cds_PRW20700.1_5289 PRW20700 Replication A 70 kDa DNA-binding subunit B 0.02 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495307.1_1305 KAA8495307 Replication factor A protein 1 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003922 GMP synthase (glutamine-hydrolyzing) activity IEP Enrichment
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Enrichment
MF GO:0004784 superoxide dismutase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
BP GO:0006164 purine nucleotide biosynthetic process IEP Enrichment
BP GO:0006177 GMP biosynthetic process IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006471 protein ADP-ribosylation IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
BP GO:0009123 nucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009152 purine ribonucleotide biosynthetic process IEP Enrichment
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009260 ribonucleotide biosynthetic process IEP Enrichment
MF GO:0016151 nickel cation binding IEP Enrichment
MF GO:0016209 antioxidant activity IEP Enrichment
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Enrichment
MF GO:0016757 glycosyltransferase activity IEP Enrichment
MF GO:0016763 pentosyltransferase activity IEP Enrichment
MF GO:0016835 carbon-oxygen lyase activity IEP Enrichment
MF GO:0016836 hydro-lyase activity IEP Enrichment
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Enrichment
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
BP GO:0046037 GMP metabolic process IEP Enrichment
BP GO:0046390 ribose phosphate biosynthetic process IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0072522 purine-containing compound biosynthetic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
BP GO:1901137 carbohydrate derivative biosynthetic process IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR013955 Rep_factor-A_C 164 311
IPR031657 REPA_OB_2 9 103
No external refs found!