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  5. EOD33430

EOD33430


Description : AARP2CN; Ribosome biogenesis protein BMS1/TSR1, C-terminal [Interproscan].


Gene families : OG_01_0003800 (OrthoFinder) Phylogenetic Tree(s): OG0003800_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD33430
Cluster HCCA: Cluster_240

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000478.23 tig00000478_g1271.t1 No description available 0.02 OrthoFinder
Cre10.g445600 30790575 No description available 0.01 OrthoFinder
PTI_01G05840.1 No alias Ribosome biogenesis protein BMS1/TSR1, C-terminal;... 0.03 OrthoFinder
Sro363_g126850.1 Contig698.g8124 Ribosome biogenesis protein BMS1 0.03 OrthoFinder
SymbC1.scaffold451.2 451.2 ATPase, AAA-type, core; Ribosome biogenesis protein... 0.01 OrthoFinder
Transcript_contig_57614 57614 ATPase, AAA-type, core; AARP2CN [Interproscan]. 0.01 OrthoFinder
Vocar.0026s0056.1 32892545 Ribosome biogenesis protein BMS1/TSR1, C-terminal;... 0.01 OrthoFinder
XM_003054849.1 MicpuC2_30726, 30726 Ribosome biogenesis protein BMS1/TSR1, C-terminal;... 0.01 OrthoFinder
lcl|BLLF01000247.1_cds_GFH09607.1_4084 HaLaN_04783, GFH09607 Bms1-type G domain-containing protein 0.01 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
BP GO:0042254 ribosome biogenesis IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003756 protein disulfide isomerase activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004312 fatty acid synthase activity IEP Enrichment
MF GO:0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity IEP Enrichment
MF GO:0004421 hydroxymethylglutaryl-CoA synthase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
CC GO:0005783 endoplasmic reticulum IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
BP GO:0006631 fatty acid metabolic process IEP Enrichment
BP GO:0006633 fatty acid biosynthetic process IEP Enrichment
BP GO:0006720 isoprenoid metabolic process IEP Enrichment
MF GO:0008080 N-acetyltransferase activity IEP Enrichment
BP GO:0008299 isoprenoid biosynthetic process IEP Enrichment
BP GO:0008610 lipid biosynthetic process IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
MF GO:0016407 acetyltransferase activity IEP Enrichment
MF GO:0016410 N-acyltransferase activity IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016746 acyltransferase activity IEP Enrichment
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP Enrichment
MF GO:0016860 intramolecular oxidoreductase activity IEP Enrichment
MF GO:0016864 intramolecular oxidoreductase activity, transposing S-S bonds IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044255 cellular lipid metabolic process IEP Enrichment
MF GO:0046912 acyltransferase, acyl groups converted into alkyl on transfer IEP Enrichment
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR007034 BMS1_TSR1_C 730 834
IPR007034 BMS1_TSR1_C 836 951
IPR012948 AARP2CN 219 273
No external refs found!