Cpa|evm.model.tig00021127.121 (tig00021127_g18802.t1)

Aliases : tig00021127_g18802.t1

Description : ATP-dependent zinc metalloprotease FTSH 5, chloroplastic OS=Arabidopsis thaliana

Gene families : OG_01_0000075 (OrthoFinder) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cpa\|evm.model.tig00021127.121
Cluster	HCCA: Cluster_109

Target	Alias	Description	ECC score	Gene Family Method
Cre09.g393950	30780473	Probable inactive ATP-dependent zinc metalloprotease...	0.03	OrthoFinder
Dusal.0121s00013.1	33195080	ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain;...	0.02	OrthoFinder
Dusal.1123s00001.1	33193861	ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain;...	0.02	OrthoFinder
EOD04811	No alias	ATP-dependent metalloprotease FtsH [Ensembl].	0.01	OrthoFinder
OT_11G02060.1	No alias	AAA ATPase, AAA+ lid domain; ATPase, AAA-type, core;...	0.02	OrthoFinder
OT_16G00870.1	No alias	ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain...	0.02	OrthoFinder
Sro21_g014710.1	Contig813.g9061	Zinc metalloprotease FTSH, chloroplastic	0.02	OrthoFinder
Sro758_g198040.1	Contig434.g5856	Zinc metalloprotease FTSH, chloroplastic	0.04	OrthoFinder
Vocar.0004s0172.1	32889955	Peptidase M41; ATPase, AAA-type, core; AAA ATPase, AAA+...	0.04	OrthoFinder
Vocar.0028s0163.1	32895585	ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain...	0.02	OrthoFinder
XM_002508006.1	MICPUN_94954, 94954	Peptidase M41; ATPase, AAA-type, core; AAA ATPase, AAA+...	0.02	OrthoFinder
XM_003057108.1	MicpuC2_55999, 55999	ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain;...	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004175	endopeptidase activity	None	Extended
MF	GO:0004222	metalloendopeptidase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008237	metallopeptidase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004197	cysteine-type endopeptidase activity	IEP	Enrichment
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Enrichment
MF	GO:0016717	oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	IEP	Enrichment
MF	GO:0016851	magnesium chelatase activity	IEP	Enrichment
MF	GO:0031072	heat shock protein binding	IEP	Enrichment
MF	GO:0051002	ligase activity, forming nitrogen-metal bonds	IEP	Enrichment
MF	GO:0051003	ligase activity, forming nitrogen-metal bonds, forming coordination complexes	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR003959	ATPase_AAA_core	790	923
IPR000642	Peptidase_M41	1004	1042
IPR041569	AAA_lid_3	946	988

External Links

No external refs found!