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  5. EOD29127

EOD29127


Description : Secretory protein 24B [Ensembl].


Gene families : OG_01_0000893 (OrthoFinder) Phylogenetic Tree(s): OG0000893_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD29127
Cluster HCCA: Cluster_178

Target Alias Description ECC score Gene Family Method Actions
Dusal.0045s00020.1 33191659 Zinc finger, Sec23/Sec24-type; Sec23/Sec24, trunk domain... 0.01 OrthoFinder
Transcript_contig_54514 54514 Sec23/Sec24 beta-sandwich; Zinc finger,... 0.01 OrthoFinder
Vocar.0001s0725.1 32884529 Sec23/Sec24, trunk domain; Sec23/Sec24, helical domain;... 0.03 OrthoFinder
lcl|BLLF01000072.1_cds_GFH07061.1_1538 HaLaN_01810, GFH07061 COP-II coat subunit 0.01 OrthoFinder
lcl|LHPG02000003.1_cds_PRW60099.1_6260 PRW60099 Transport Sec24-like protein 0.04 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8496455.1_184 KAA8496455 Protein transport protein Sec24-like CEF 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
CC GO:0030127 COPII vesicle coat IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0005543 phospholipid binding IEP Enrichment
BP GO:0005984 disaccharide metabolic process IEP Enrichment
BP GO:0005991 trehalose metabolic process IEP Enrichment
BP GO:0005992 trehalose biosynthetic process IEP Enrichment
BP GO:0006650 glycerophospholipid metabolic process IEP Enrichment
BP GO:0008064 regulation of actin polymerization or depolymerization IEP Enrichment
BP GO:0008272 sulfate transport IEP Enrichment
MF GO:0008289 lipid binding IEP Enrichment
BP GO:0009312 oligosaccharide biosynthetic process IEP Enrichment
BP GO:0009966 regulation of signal transduction IEP Enrichment
BP GO:0010646 regulation of cell communication IEP Enrichment
MF GO:0015116 sulfate transmembrane transporter activity IEP Enrichment
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Enrichment
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Enrichment
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Enrichment
MF GO:0019899 enzyme binding IEP Enrichment
BP GO:0023051 regulation of signaling IEP Enrichment
BP GO:0030832 regulation of actin filament length IEP Enrichment
BP GO:0030833 regulation of actin filament polymerization IEP Enrichment
MF GO:0031625 ubiquitin protein ligase binding IEP Enrichment
BP GO:0032012 regulation of ARF protein signal transduction IEP Enrichment
BP GO:0032271 regulation of protein polymerization IEP Enrichment
BP GO:0032535 regulation of cellular component size IEP Enrichment
BP GO:0032956 regulation of actin cytoskeleton organization IEP Enrichment
BP GO:0032970 regulation of actin filament-based process IEP Enrichment
BP GO:0033043 regulation of organelle organization IEP Enrichment
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Enrichment
MF GO:0035091 phosphatidylinositol binding IEP Enrichment
BP GO:0043254 regulation of protein-containing complex assembly IEP Enrichment
BP GO:0044087 regulation of cellular component biogenesis IEP Enrichment
MF GO:0044389 ubiquitin-like protein ligase binding IEP Enrichment
BP GO:0046351 disaccharide biosynthetic process IEP Enrichment
BP GO:0046486 glycerolipid metabolic process IEP Enrichment
BP GO:0046488 phosphatidylinositol metabolic process IEP Enrichment
BP GO:0046578 regulation of Ras protein signal transduction IEP Enrichment
BP GO:0048583 regulation of response to stimulus IEP Enrichment
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Enrichment
BP GO:0051128 regulation of cellular component organization IEP Enrichment
BP GO:0051493 regulation of cytoskeleton organization IEP Enrichment
BP GO:0072348 sulfur compound transport IEP Enrichment
BP GO:0090066 regulation of anatomical structure size IEP Enrichment
BP GO:0110053 regulation of actin filament organization IEP Enrichment
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Enrichment
BP GO:1902531 regulation of intracellular signal transduction IEP Enrichment
BP GO:1902903 regulation of supramolecular fiber organization IEP Enrichment
InterPro domains Description Start Stop
IPR007123 Gelsolin-like_dom 979 1034
IPR006895 Znf_Sec23_Sec24 415 451
IPR006896 Sec23/24_trunk_dom 481 721
IPR006900 Sec23/24_helical_dom 823 922
No external refs found!