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  5. EOD27522

EOD27522


Description : Leucine-rich repeat [Interproscan].


Gene families : OG_01_0000170 (OrthoFinder) Phylogenetic Tree(s): OG0000170_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD27522
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
EOD05047 No alias Leucine-rich repeat [Interproscan]. 0.03 OrthoFinder
EOD10767 No alias Leucine-rich repeat [Interproscan]. 0.04 OrthoFinder
EOD14118 No alias Leucine-rich repeat [Interproscan]. 0.03 OrthoFinder
EOD17301 No alias Leucine-rich repeat [Interproscan]. 0.04 OrthoFinder
EOD21547 No alias Leucine-rich repeat [Interproscan]. 0.03 OrthoFinder
EOD26951 No alias Leucine-rich repeat [Interproscan]. 0.06 OrthoFinder
EOD29440 No alias Hypothetical protein [Ensembl]. 0.03 OrthoFinder
EOD30440 No alias Leucine-rich repeat [Interproscan]. 0.03 OrthoFinder
EOD31704 No alias Hypothetical protein [Ensembl]. 0.02 OrthoFinder
EOD36507 No alias Leucine-rich repeat [Interproscan]. 0.04 OrthoFinder
EOD38922 No alias Leucine-rich repeat [Interproscan]. 0.06 OrthoFinder
Sro1653_g288840.1 Contig3957.g30320 NLR family, pyrin domain containing 13 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004252 serine-type endopeptidase activity IEP Enrichment
MF GO:0005506 iron ion binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005576 extracellular region IEP Enrichment
BP GO:0006163 purine nucleotide metabolic process IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008236 serine-type peptidase activity IEP Enrichment
BP GO:0009150 purine ribonucleotide metabolic process IEP Enrichment
BP GO:0009259 ribonucleotide metabolic process IEP Enrichment
BP GO:0009405 obsolete pathogenesis IEP Enrichment
MF GO:0015399 primary active transmembrane transporter activity IEP Enrichment
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0017171 serine hydrolase activity IEP Enrichment
BP GO:0019693 ribose phosphate metabolic process IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment
BP GO:0072521 purine-containing compound metabolic process IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 386 407
IPR001611 Leu-rich_rpt 324 345
IPR001611 Leu-rich_rpt 510 531
IPR001611 Leu-rich_rpt 417 438
IPR001611 Leu-rich_rpt 543 562
IPR001611 Leu-rich_rpt 449 469
IPR001611 Leu-rich_rpt 481 500
IPR001611 Leu-rich_rpt 355 376
No external refs found!