1. Home
  2. Species
  3. Emiliania huxleyi
  4. Sequence
  5. EOD26441

EOD26441


Description : Putative ABC transporter [Ensembl].


Gene families : OG_01_0000036 (OrthoFinder) Phylogenetic Tree(s): OG0000036_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD26441
Cluster HCCA: Cluster_127

Target Alias Description ECC score Gene Family Method Actions
Cre16.g692300 30777566 Solute transport.primary active transport.ABC... 0.03 OrthoFinder
EOD06150 No alias Putative ABC transporter [Ensembl]. 0.02 OrthoFinder
EOD08477 No alias Putative ABC transporter [Ensembl]. 0.02 OrthoFinder
PTI_03G01030.1 No alias ABC transporter type 1, transmembrane domain; ABC... 0.01 OrthoFinder
PTI_13G02060.1 No alias ABC transporter type 1, transmembrane domain; ABC... 0.02 OrthoFinder
Sro1117_g242960.1 Contig1027.g10242 Lactococcin-G-processing and transport ATP-binding protein LagD 0.01 OrthoFinder
Sro3104_g343850.1 Contig2425.g19841 Colicin V secretion/processing ATP-binding protein CvaB 0.01 OrthoFinder
SymbC1.scaffold10331.2 10331.2 ABC transporter-like; ABC transporter type 1,... 0.02 OrthoFinder
Transcript_contig_54412 54412 ABC transporter type 1, transmembrane domain; ABC... 0.01 OrthoFinder
Transcript_contig_89223 89223 ABC transporter type 1, transmembrane domain; ABC... 0.01 OrthoFinder
XM_002502028.1 MICPUN_58471, 58471 ATP-binding cassette superfamily 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004843 thiol-dependent deubiquitinase IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
BP GO:0006644 phospholipid metabolic process IEP Enrichment
BP GO:0006650 glycerophospholipid metabolic process IEP Enrichment
BP GO:0006820 anion transport IEP Enrichment
BP GO:0006904 vesicle docking involved in exocytosis IEP Enrichment
MF GO:0008242 omega peptidase activity IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Enrichment
BP GO:0022406 membrane docking IEP Enrichment
BP GO:0044255 cellular lipid metabolic process IEP Enrichment
BP GO:0046486 glycerolipid metabolic process IEP Enrichment
BP GO:0046488 phosphatidylinositol metabolic process IEP Enrichment
BP GO:0048278 vesicle docking IEP Enrichment
BP GO:0051640 organelle localization IEP Enrichment
MF GO:0101005 deubiquitinase activity IEP Enrichment
BP GO:0140029 exocytic process IEP Enrichment
BP GO:0140056 organelle localization by membrane tethering IEP Enrichment
MF GO:1990380 Lys48-specific deubiquitinase activity IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 973 1122
IPR003439 ABC_transporter-like_ATP-bd 274 423
IPR011527 ABC1_TM_dom 592 853
IPR011527 ABC1_TM_dom 3 169
No external refs found!