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Description : SAM-dependent methyltransferase RsmB/NOP2-type [Interproscan].
Gene families : OG_01_0001258 (OrthoFinder) Phylogenetic Tree(s): OG0001258_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: EOD26214 | |
| Cluster | HCCA: Cluster_226 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| lcl|LHPG02000007.1_cds_PRW56905.1_8933 | PRW56905 | Phosphoglucomutase PGM3 isoform B | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008168 | methyltransferase activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003916 | DNA topoisomerase activity | IEP | Enrichment |
| MF | GO:0005543 | phospholipid binding | IEP | Enrichment |
| CC | GO:0005737 | cytoplasm | IEP | Enrichment |
| BP | GO:0006265 | DNA topological change | IEP | Enrichment |
| BP | GO:0006643 | membrane lipid metabolic process | IEP | Enrichment |
| BP | GO:0006664 | glycolipid metabolic process | IEP | Enrichment |
| BP | GO:0006720 | isoprenoid metabolic process | IEP | Enrichment |
| BP | GO:0006886 | intracellular protein transport | IEP | Enrichment |
| BP | GO:0008104 | protein localization | IEP | Enrichment |
| BP | GO:0008299 | isoprenoid biosynthetic process | IEP | Enrichment |
| MF | GO:0008408 | 3'-5' exonuclease activity | IEP | Enrichment |
| BP | GO:0008610 | lipid biosynthetic process | IEP | Enrichment |
| BP | GO:0008654 | phospholipid biosynthetic process | IEP | Enrichment |
| MF | GO:0009029 | tetraacyldisaccharide 4'-kinase activity | IEP | Enrichment |
| BP | GO:0009245 | lipid A biosynthetic process | IEP | Enrichment |
| BP | GO:0009247 | glycolipid biosynthetic process | IEP | Enrichment |
| BP | GO:0009311 | oligosaccharide metabolic process | IEP | Enrichment |
| BP | GO:0009312 | oligosaccharide biosynthetic process | IEP | Enrichment |
| MF | GO:0010181 | FMN binding | IEP | Enrichment |
| BP | GO:0015031 | protein transport | IEP | Enrichment |
| CC | GO:0016592 | mediator complex | IEP | Enrichment |
| BP | GO:0031123 | RNA 3'-end processing | IEP | Enrichment |
| BP | GO:0031124 | mRNA 3'-end processing | IEP | Enrichment |
| MF | GO:0032553 | ribonucleotide binding | IEP | Enrichment |
| BP | GO:0033036 | macromolecule localization | IEP | Enrichment |
| MF | GO:0035091 | phosphatidylinositol binding | IEP | Enrichment |
| BP | GO:0044255 | cellular lipid metabolic process | IEP | Enrichment |
| BP | GO:0045184 | establishment of protein localization | IEP | Enrichment |
| BP | GO:0046467 | membrane lipid biosynthetic process | IEP | Enrichment |
| BP | GO:0046493 | lipid A metabolic process | IEP | Enrichment |
| BP | GO:0046907 | intracellular transport | IEP | Enrichment |
| BP | GO:0051641 | cellular localization | IEP | Enrichment |
| BP | GO:0051649 | establishment of localization in cell | IEP | Enrichment |
| BP | GO:0071103 | DNA conformation change | IEP | Enrichment |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Enrichment |
| BP | GO:1901269 | lipooligosaccharide metabolic process | IEP | Enrichment |
| BP | GO:1901271 | lipooligosaccharide biosynthetic process | IEP | Enrichment |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
| BP | GO:1903509 | liposaccharide metabolic process | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001678 | MeTrfase_RsmB/NOP2 | 271 | 367 |
| No external refs found! |