Description : BspA type Leucine rich repeat region; U box domain [Interproscan].

Gene families : OG_01_0000010 (OrthoFinder) Phylogenetic Tree(s): OG0000010_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: EOD24882
Cluster HCCA: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
Cz01g14020.t1 No alias U box domain [Interproscan]. 0.02 OrthoFinder
EOD18362 No alias U box domain [Interproscan]. 0.01 OrthoFinder
EOD19557 No alias U box domain [Interproscan]. 0.01 OrthoFinder
EOD21859 No alias DSS1/SEM1; U box domain [Interproscan]. 0.03 OrthoFinder
lcl|LHPG02000008.1_cds_PRW56411.1_9600 PRW56411 Ankyrin repeat 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
BP GO:0016567 protein ubiquitination IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
InterPro domains Description Start Stop
IPR026906 LRR_5 316 422
IPR026906 LRR_5 160 287
IPR026906 LRR_5 39 128
IPR003613 Ubox_domain 456 521
No external refs found!