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  5. Cpa|evm.model.tig00021037.8

Cpa|evm.model.tig00021037.8 (tig00021037_g17413.t1)


Aliases : tig00021037_g17413.t1

Description : Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat carboxylase/oxygenase (RuBisCo) activity.regulation.CbbY xylulose-1,5-bisphosphate phosphatase


Gene families : OG_01_0000808 (OrthoFinder) Phylogenetic Tree(s): OG0000808_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021037.8
Cluster HCCA: Cluster_149

Target Alias Description ECC score Gene Family Method Actions
Cre03.g206550 30787385 Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.06 OrthoFinder
Cre14.g623000 30776618 Haloacid dehalogenase-like hydrolase domain-containing... 0.05 OrthoFinder
Cre16.g656650 30776945 Haloacid dehalogenase-like hydrolase domain-containing... 0.03 OrthoFinder
Cz03g30010.t1 No alias Haloacid dehalogenase-like hydrolase [Interproscan]. 0.05 OrthoFinder
Cz09g07060.t1 No alias Haloacid dehalogenase-like hydrolase [Interproscan]. 0.04 OrthoFinder
Dusal.0233s00018.1 33196209 Haloacid dehalogenase-like hydrolase [Interproscan]. 0.02 OrthoFinder
Dusal.0424s00014.1 33197354 Haloacid dehalogenase-like hydrolase [Interproscan]. 0.03 OrthoFinder
OT_01G00140.1 No alias Haloacid dehalogenase-like hydrolase [Interproscan]. 0.04 OrthoFinder
OT_06G04150.1 No alias Haloacid dehalogenase-like hydrolase [Interproscan]. 0.02 OrthoFinder
PTI_10G02260.1 No alias Haloacid dehalogenase-like hydrolase [Interproscan]. 0.02 OrthoFinder
Sro246_g097880.1 Contig171.g1972 Dehalogenase-like hydrolase domain-containing protein At4g39970 0.02 OrthoFinder
Sro66_g037220.1 Contig399.g5392 CBBY-like protein 0.02 OrthoFinder
TP07G00950.1 No alias Haloacid dehalogenase-like hydrolase [Interproscan]. 0.03 OrthoFinder
Vocar.0011s0231.1 32895405 Haloacid dehalogenase-like hydrolase [Interproscan]. 0.02 OrthoFinder
XM_002506423.1 MICPUN_70860, 70860 Haloacid dehalogenase-like hydrolase [Interproscan]. 0.02 OrthoFinder
XM_002507717.1 MICPUN_55588, 55588 Haloacid-halidohydrolase 0.02 OrthoFinder
lcl|BLLF01001921.1_cds_GFH21867.1_16344 HaLaN_19244, GFH21867 Hypothetical protein 0.01 OrthoFinder
lcl|LHPG02000018.1_cds_PRW32985.1_3799 PRW32985 Haloacid dehalogenase-like hydrolase domain-containing protein 0.04 OrthoFinder
lcl|VRMN01000017.1_cds_KAA8490921.1_6124 KAA8490921 CBBY-like protein 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004089 carbonate dehydratase activity IEP Enrichment
MF GO:0004185 serine-type carboxypeptidase activity IEP Enrichment
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
MF GO:0004329 formate-tetrahydrofolate ligase activity IEP Enrichment
MF GO:0004665 prephenate dehydrogenase (NADP+) activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005506 iron ion binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006570 tyrosine metabolic process IEP Enrichment
BP GO:0006571 tyrosine biosynthetic process IEP Enrichment
BP GO:0006801 superoxide metabolic process IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
MF GO:0008977 prephenate dehydrogenase (NAD+) activity IEP Enrichment
BP GO:0009072 aromatic amino acid family metabolic process IEP Enrichment
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Enrichment
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Enrichment
BP GO:0016226 iron-sulfur cluster assembly IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
BP GO:0031163 metallo-sulfur cluster assembly IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:0070008 serine-type exopeptidase activity IEP Enrichment
BP GO:0072593 reactive oxygen species metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR041492 HAD_2 92 264
No external refs found!