1. Home
  2. Species
  3. Emiliania huxleyi
  4. Sequence
  5. EOD22522

EOD22522


Description : SET domain; Zinc finger, MYND-type [Interproscan].


Gene families : OG_01_0000019 (OrthoFinder) Phylogenetic Tree(s): OG0000019_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD22522
Cluster HCCA: Cluster_224

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021108.7 tig00000553_g2098.t1 No description available 0.02 OrthoFinder
Cz03g22170.t1 No alias SET domain [Interproscan]. 0.04 OrthoFinder
Cz03g37010.t1 No alias SET domain [Interproscan]. 0.02 OrthoFinder
Cz03g40320.t1 No alias Hypothetical protein 0.02 OrthoFinder
Cz04g25200.t1 No alias SET domain [Interproscan]. 0.02 OrthoFinder
Cz04g25210.t1 No alias Hypothetical protein 0.03 OrthoFinder
Dusal.0151s00011.1 33191979 Hypothetical protein 0.03 OrthoFinder
Dusal.0293s00006.1 33190178 SET domain [Interproscan]. 0.03 OrthoFinder
PTI_17G02830.1 No alias SET domain [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold1842.1 1842.1 SET domain [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold7644.2 7644.2 Hypothetical protein 0.02 OrthoFinder
TP05G03200.1 No alias SET domain [Interproscan]. 0.02 OrthoFinder
Vocar.0012s0233.1 32894971 SET domain [Interproscan]. 0.02 OrthoFinder
XM_002500747.1 MICPUN_56617, 56617 Set domain protein 0.02 OrthoFinder
XM_002506785.1 MICPUN_89128, 89128 Set domain protein 0.04 OrthoFinder
XM_003058744.1 MicpuC2_57921, 57921 Set domain protein 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Enrichment
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Enrichment
MF GO:0004014 adenosylmethionine decarboxylase activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0006576 cellular biogenic amine metabolic process IEP Enrichment
BP GO:0006595 polyamine metabolic process IEP Enrichment
BP GO:0006596 polyamine biosynthetic process IEP Enrichment
BP GO:0006597 spermine biosynthetic process IEP Enrichment
BP GO:0008215 spermine metabolic process IEP Enrichment
BP GO:0008216 spermidine metabolic process IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
BP GO:0008295 spermidine biosynthetic process IEP Enrichment
BP GO:0009116 nucleoside metabolic process IEP Enrichment
BP GO:0009308 amine metabolic process IEP Enrichment
BP GO:0009309 amine biosynthetic process IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016289 CoA hydrolase activity IEP Enrichment
MF GO:0016790 thiolester hydrolase activity IEP Enrichment
MF GO:0016831 carboxy-lyase activity IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
BP GO:0030490 maturation of SSU-rRNA IEP Enrichment
MF GO:0030515 snoRNA binding IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Enrichment
BP GO:0044106 cellular amine metabolic process IEP Enrichment
BP GO:1901657 glycosyl compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR002893 Znf_MYND 32 65
IPR001214 SET_dom 1 241
No external refs found!