Description : WD40 repeat; Small-subunit processome, Utp21 [Interproscan].
Gene families : OG_01_0002791 (OrthoFinder) Phylogenetic Tree(s): OG0002791_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: EOD22329 | |
Cluster | HCCA: Cluster_112 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cpa|evm.model.tig00021348.51 | tig00021348_g20554.t1 | No description available | 0.05 | OrthoFinder | |
Cre10.g466250 | 30790775 | No description available | 0.17 | OrthoFinder | |
Cz08g20100.t1 | No alias | WD40 repeat; Small-subunit processome, Utp21 [Interproscan]. | 0.13 | OrthoFinder | |
Dusal.0063s00009.1 | 33196767 | WD40 repeat; Small-subunit processome, Utp21 [Interproscan]. | 0.04 | OrthoFinder | |
OT_17G00290.1 | No alias | Small-subunit processome, Utp21; WD40 repeat;... | 0.04 | OrthoFinder | |
PTI_01G00980.1 | No alias | Small-subunit processome, Utp21; WD40 repeat [Interproscan]. | 0.16 | OrthoFinder | |
Sro1313_g261950.1 | Contig4199.g31963 | RNA-associated protein 21 homolog | 0.13 | OrthoFinder | |
TP02G03700.1 | No alias | WD40 repeat; Small-subunit processome, Utp21 [Interproscan]. | 0.08 | OrthoFinder | |
Transcript_contig_5700 | 5700 | Hypothetical protein | 0.02 | OrthoFinder | |
Vocar.0029s0128.1 | 32887338 | WD40 repeat; Small-subunit processome, Utp21 [Interproscan]. | 0.05 | OrthoFinder | |
XM_002508565.1 | MICPUN_98006, 98006 | Small-subunit processome, Utp21; WD40 repeat [Interproscan]. | 0.1 | OrthoFinder | |
lcl|BLLF01000022.1_cds_GFH06094.1_571 | HaLaN_00667, GFH06094 | Small-subunit processome, Utp21 [Interproscan]. | 0.03 | OrthoFinder | |
lcl|BLLF01001420.1_cds_GFH19190.1_13667 | HaLaN_16097, GFH19190 | U3 small nucleolar RNA-associated 21-like protein | 0.04 | OrthoFinder | |
lcl|LHPG02000005.1_cds_PRW58237.1_8075 | PRW58237 | U3 small nucleolar RNA-associated 21-like protein | 0.07 | OrthoFinder | |
lcl|VRMN01000009.1_cds_KAA8492447.1_9140 | KAA8492447 | WD repeat-containing protein 36 | 0.05 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005515 | protein binding | IEA | Interproscan |
BP | GO:0006364 | rRNA processing | IEA | Interproscan |
CC | GO:0032040 | small-subunit processome | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000105 | histidine biosynthetic process | IEP | Enrichment |
BP | GO:0000462 | maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | IEP | Enrichment |
BP | GO:0003333 | amino acid transmembrane transport | IEP | Enrichment |
MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
MF | GO:0003723 | RNA binding | IEP | Enrichment |
MF | GO:0003860 | 3-hydroxyisobutyryl-CoA hydrolase activity | IEP | Enrichment |
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | Enrichment |
MF | GO:0004399 | histidinol dehydrogenase activity | IEP | Enrichment |
CC | GO:0005634 | nucleus | IEP | Enrichment |
CC | GO:0005730 | nucleolus | IEP | Enrichment |
BP | GO:0006351 | transcription, DNA-templated | IEP | Enrichment |
BP | GO:0006547 | histidine metabolic process | IEP | Enrichment |
BP | GO:0006865 | amino acid transport | IEP | Enrichment |
BP | GO:0006886 | intracellular protein transport | IEP | Enrichment |
BP | GO:0006888 | endoplasmic reticulum to Golgi vesicle-mediated transport | IEP | Enrichment |
BP | GO:0008104 | protein localization | IEP | Enrichment |
MF | GO:0008134 | transcription factor binding | IEP | Enrichment |
MF | GO:0008176 | tRNA (guanine-N7-)-methyltransferase activity | IEP | Enrichment |
BP | GO:0009451 | RNA modification | IEP | Enrichment |
BP | GO:0015031 | protein transport | IEP | Enrichment |
BP | GO:0015849 | organic acid transport | IEP | Enrichment |
MF | GO:0016289 | CoA hydrolase activity | IEP | Enrichment |
MF | GO:0016423 | tRNA (guanine) methyltransferase activity | IEP | Enrichment |
MF | GO:0016779 | nucleotidyltransferase activity | IEP | Enrichment |
MF | GO:0016790 | thiolester hydrolase activity | IEP | Enrichment |
CC | GO:0030120 | vesicle coat | IEP | Enrichment |
CC | GO:0030127 | COPII vesicle coat | IEP | Enrichment |
BP | GO:0030490 | maturation of SSU-rRNA | IEP | Enrichment |
MF | GO:0030515 | snoRNA binding | IEP | Enrichment |
BP | GO:0032774 | RNA biosynthetic process | IEP | Enrichment |
BP | GO:0033036 | macromolecule localization | IEP | Enrichment |
MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | Enrichment |
CC | GO:0043226 | organelle | IEP | Enrichment |
CC | GO:0043227 | membrane-bounded organelle | IEP | Enrichment |
CC | GO:0043229 | intracellular organelle | IEP | Enrichment |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Enrichment |
BP | GO:0045184 | establishment of protein localization | IEP | Enrichment |
BP | GO:0046907 | intracellular transport | IEP | Enrichment |
BP | GO:0051641 | cellular localization | IEP | Enrichment |
BP | GO:0051649 | establishment of localization in cell | IEP | Enrichment |
BP | GO:0071702 | organic substance transport | IEP | Enrichment |
BP | GO:0071705 | nitrogen compound transport | IEP | Enrichment |
MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | Enrichment |
MF | GO:0097747 | RNA polymerase activity | IEP | Enrichment |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Enrichment |
MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
BP | GO:1903825 | organic acid transmembrane transport | IEP | Enrichment |
BP | GO:1905039 | carboxylic acid transmembrane transport | IEP | Enrichment |
No external refs found! |