EOD21859


Description : DSS1/SEM1; U box domain [Interproscan].


Gene families : OG_01_0000010 (OrthoFinder) Phylogenetic Tree(s): OG0000010_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD21859
Cluster HCCA: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
EOD19513 No alias U box domain [Interproscan]. 0.03 OrthoFinder
EOD19557 No alias U box domain [Interproscan]. 0.02 OrthoFinder
EOD24882 No alias BspA type Leucine rich repeat region; U box domain... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
BP GO:0006406 mRNA export from nucleus IEA Interproscan
CC GO:0008541 proteasome regulatory particle, lid subcomplex IEA Interproscan
BP GO:0016567 protein ubiquitination IEA Interproscan
BP GO:0043248 proteasome assembly IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Enrichment
BP GO:0006534 cysteine metabolic process IEP Enrichment
BP GO:0006790 sulfur compound metabolic process IEP Enrichment
BP GO:0009069 serine family amino acid metabolic process IEP Enrichment
BP GO:0009092 homoserine metabolic process IEP Enrichment
BP GO:0019346 transsulfuration IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
MF GO:0031419 cobalamin binding IEP Enrichment
BP GO:0050667 homocysteine metabolic process IEP Enrichment
BP GO:1901605 alpha-amino acid metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR007834 DSS1_SEM1 12 67
IPR003613 Ubox_domain 165 233
No external refs found!