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EOD21347


Description : Chaperonin Cpn60/TCP-1 family [Interproscan].


Gene families : OG_01_0002508 (OrthoFinder) Phylogenetic Tree(s): OG0002508_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD21347
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021350.16 tig00021350_g20633.t1 Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.03 OrthoFinder
Cre10.g439100 30790162, CCT1 Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.06 OrthoFinder
Cz06g06090.t1 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.06 OrthoFinder
Dusal.1206s00002.1 33197631 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.01 OrthoFinder
Dusal.1206s00003.1 33197630 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.03 OrthoFinder
OT_03G03170.1 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.02 OrthoFinder
Sro1027_g233030.1 Contig109.g1254 T-complex protein 1 subunit alpha (Fragment) 0.05 OrthoFinder
Transcript_contig_58198 58198 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.02 OrthoFinder
XM_002499911.1 MICPUN_90096, 90096 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.07 OrthoFinder
XM_003055156.1 MicpuC2_46385, 46385 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.03 OrthoFinder
lcl|LHPG02000028.1_cds_PRW05817.1_5977 PRW05817 T-complex 1 subunit alpha 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP Enrichment
MF GO:0004674 protein serine/threonine kinase activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005783 endoplasmic reticulum IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0006720 isoprenoid metabolic process IEP Enrichment
BP GO:0006721 terpenoid metabolic process IEP Enrichment
BP GO:0008299 isoprenoid biosynthetic process IEP Enrichment
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Enrichment
BP GO:0016114 terpenoid biosynthetic process IEP Enrichment
MF GO:0016744 transketolase or transaldolase activity IEP Enrichment
MF GO:0016757 glycosyltransferase activity IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
InterPro domains Description Start Stop
IPR002423 Cpn60/TCP-1 338 426
IPR002423 Cpn60/TCP-1 27 314
No external refs found!