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  5. EOD21310

EOD21310


Description : Hypothetical protein [Ensembl].


Gene families : OG_01_0003140 (OrthoFinder) Phylogenetic Tree(s): OG0003140_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD21310
Cluster HCCA: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000852.39 tig00000852_g5050.t1 Protein biosynthesis.cytosolic ribosome.small subunit... 0.05 OrthoFinder
Cre13.g606850 30784338 Protein biosynthesis.cytosolic ribosome.small subunit... 0.05 OrthoFinder
Cz05g19220.t1 No alias WD40 repeat [Interproscan]. 0.03 OrthoFinder
Dusal.1403s00002.1 33199971 WD40 repeat [Interproscan]. 0.02 OrthoFinder
OT_04G04050.1 No alias WD40 repeat [Interproscan]. 0.03 OrthoFinder
Sro26_g017510.1 Contig2432.g19922 RNA-associated protein 4 homolog 0.06 OrthoFinder
TP01G10340.1 No alias Hypothetical protein 0.03 OrthoFinder
Transcript_contig_57546 57546 WD40 repeat [Interproscan]. 0.02 OrthoFinder
Vocar.0043s0033.1 32886908 Hypothetical protein 0.02 OrthoFinder
XM_002505872.1 MICPUN_104036, 104036 WD40 repeat [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01001930.1_cds_GFH21916.1_16393 HaLaN_19299, GFH21916 WD_REPEATS_REGION domain-containing protein 0.04 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61122.1_641 PRW61122 WD40 repeat 0.05 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Enrichment
CC GO:0005730 nucleolus IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
MF GO:0008134 transcription factor binding IEP Enrichment
MF GO:0008173 RNA methyltransferase activity IEP Enrichment
MF GO:0008175 tRNA methyltransferase activity IEP Enrichment
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEP Enrichment
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Enrichment
BP GO:0030490 maturation of SSU-rRNA IEP Enrichment
MF GO:0030515 snoRNA binding IEP Enrichment
CC GO:0030684 preribosome IEP Enrichment
CC GO:0032040 small-subunit processome IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment

No InterPro domains available for this sequence

No external refs found!