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Aliases : tig00021014_g17092.t1
Description : DNA repair protein RAD5A OS=Arabidopsis thaliana
Gene families : OG_01_0000210 (OrthoFinder) Phylogenetic Tree(s): OG0000210_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cpa|evm.model.tig00021014.10 | |
| Cluster | HCCA: Cluster_197 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cz10g28060.t1 | No alias | SNF2-related, N-terminal domain; Zinc finger, C3HC4 type... | 0.02 | OrthoFinder | |
| Dusal.0160s00016.1 | 33188321 | RING-type zinc-finger, LisH dimerisation motif;... | 0.02 | OrthoFinder | |
| Dusal.0215s00007.1 | 33185751 | Helicase, C-terminal; SNF2-related, N-terminal domain;... | 0.01 | OrthoFinder | |
| EOD35283 | No alias | Helicase, C-terminal; SNF2-related, N-terminal domain;... | 0.03 | OrthoFinder | |
| Sro298_g110990.1 | Contig4399.g33030 | Regulator of chromatin subfamily A member 3-like 1 | 0.02 | OrthoFinder | |
| SymbC1.scaffold4407.7 | 4407.7 | SNF2-related, N-terminal domain [Interproscan]. | 0.01 | OrthoFinder | |
| lcl|BLLF01001332.1_cds_GFH18643.1_13120 | HaLaN_15482, GFH18643 | Helicase ATP-binding domain-containing protein | 0.02 | OrthoFinder | |
| lcl|VRMN01000010.1_cds_KAA8492265.1_5448 | KAA8492265 | Putative SWI/SNF-related matrix-associated... | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Enrichment |
| MF | GO:0003674 | molecular_function | IEP | Enrichment |
| MF | GO:0003682 | chromatin binding | IEP | Enrichment |
| MF | GO:0003774 | motor activity | IEP | Enrichment |
| MF | GO:0003777 | microtubule motor activity | IEP | Enrichment |
| MF | GO:0003824 | catalytic activity | IEP | Enrichment |
| MF | GO:0004672 | protein kinase activity | IEP | Enrichment |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | Enrichment |
| MF | GO:0005488 | binding | IEP | Enrichment |
| MF | GO:0005515 | protein binding | IEP | Enrichment |
| MF | GO:0005524 | ATP binding | IEP | Enrichment |
| BP | GO:0006928 | movement of cell or subcellular component | IEP | Enrichment |
| BP | GO:0007017 | microtubule-based process | IEP | Enrichment |
| BP | GO:0007018 | microtubule-based movement | IEP | Enrichment |
| MF | GO:0016301 | kinase activity | IEP | Enrichment |
| MF | GO:0016740 | transferase activity | IEP | Enrichment |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Enrichment |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | Enrichment |
| MF | GO:0017076 | purine nucleotide binding | IEP | Enrichment |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | Enrichment |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Enrichment |
| MF | GO:0032553 | ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Enrichment |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Enrichment |
| MF | GO:0036094 | small molecule binding | IEP | Enrichment |
| MF | GO:0043167 | ion binding | IEP | Enrichment |
| MF | GO:0043168 | anion binding | IEP | Enrichment |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Enrichment |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Enrichment |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Enrichment |
| No external refs found! |