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Aliases : tig00021012_g17007.t1
Description : Cryptochrome DASH, chloroplastic/mitochondrial OS=Solanum lycopersicum
Gene families : OG_01_0000085 (OrthoFinder) Phylogenetic Tree(s): OG0000085_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cpa|evm.model.tig00021012.26 | |
| Cluster | HCCA: Cluster_88 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre01.g030650 | 30789664 | Cryptochrome DASH, chloroplastic/mitochondrial... | 0.02 | OrthoFinder | |
| Cre02.g078939 | 30785814 | Cryptochrome DASH, chloroplastic/mitochondrial... | 0.02 | OrthoFinder | |
| Cre06.g278251 | 30779665 | DNA damage response.DNA repair... | 0.02 | OrthoFinder | |
| EOD11134 | No alias | Putative Cry-DASH cryptochrome [Ensembl]. | 0.02 | OrthoFinder | |
| EOD24687 | No alias | Deoxyribodipyrimidine photolyase/cryptochrome [Ensembl]. | 0.03 | OrthoFinder | |
| EOD31738 | No alias | Deoxyribodipyrimidine photolyase/cryptochrome [Ensembl]. | 0.01 | OrthoFinder | |
| PTI_08G03200.1 | No alias | Cryptochrome/DNA photolyase, FAD-binding domain; DNA... | 0.02 | OrthoFinder | |
| Sro2726_g335660.1 | Contig3579.g27670 | Cryptochrome DASH | 0.02 | OrthoFinder | |
| Sro580_g170080.1 | Contig2039.g17523 | Deoxyribodipyrimidine photo-lyase | 0.03 | OrthoFinder | |
| Transcript_contig_89944 | 89944 | DNA photolyase, N-terminal [Interproscan]. | 0.01 | OrthoFinder | |
| Vocar.0004s0450.1 | 32889785 | DNA photolyase, N-terminal; Cryptochrome/DNA photolyase,... | 0.02 | OrthoFinder | |
| XM_002508739.1 | MICPUN_61974, 61974 | Cryptochrome/DNA photolyase, FAD-binding domain; DNA... | 0.04 | OrthoFinder | |
| XM_003057723.1 | MicpuC2_16082, 16082 | Cryptochrome/DNA photolyase, FAD-binding domain; DNA... | 0.02 | OrthoFinder | |
| XM_003061182.1 | MicpuC2_19486, 19486 | Cryptochrome/DNA photolyase, FAD-binding domain; DNA... | 0.02 | OrthoFinder | |
| lcl|BLLF01001533.1_cds_GFH19868.1_14345 | HaLaN_16893, GFH19868 | Photolyase/cryptochrome alpha/beta domain-containing protein | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000049 | tRNA binding | IEP | Enrichment |
| BP | GO:0000096 | sulfur amino acid metabolic process | IEP | Enrichment |
| BP | GO:0000097 | sulfur amino acid biosynthetic process | IEP | Enrichment |
| MF | GO:0000155 | phosphorelay sensor kinase activity | IEP | Enrichment |
| BP | GO:0000160 | phosphorelay signal transduction system | IEP | Enrichment |
| MF | GO:0000774 | adenyl-nucleotide exchange factor activity | IEP | Enrichment |
| MF | GO:0004672 | protein kinase activity | IEP | Enrichment |
| MF | GO:0004673 | protein histidine kinase activity | IEP | Enrichment |
| BP | GO:0006457 | protein folding | IEP | Enrichment |
| BP | GO:0006534 | cysteine metabolic process | IEP | Enrichment |
| BP | GO:0006535 | cysteine biosynthetic process from serine | IEP | Enrichment |
| BP | GO:0006563 | L-serine metabolic process | IEP | Enrichment |
| BP | GO:0006790 | sulfur compound metabolic process | IEP | Enrichment |
| BP | GO:0007165 | signal transduction | IEP | Enrichment |
| BP | GO:0008150 | biological_process | IEP | Enrichment |
| BP | GO:0008652 | cellular amino acid biosynthetic process | IEP | Enrichment |
| BP | GO:0009069 | serine family amino acid metabolic process | IEP | Enrichment |
| BP | GO:0009070 | serine family amino acid biosynthetic process | IEP | Enrichment |
| BP | GO:0009987 | cellular process | IEP | Enrichment |
| BP | GO:0016053 | organic acid biosynthetic process | IEP | Enrichment |
| MF | GO:0016740 | transferase activity | IEP | Enrichment |
| MF | GO:0016775 | phosphotransferase activity, nitrogenous group as acceptor | IEP | Enrichment |
| MF | GO:0016782 | transferase activity, transferring sulphur-containing groups | IEP | Enrichment |
| BP | GO:0019344 | cysteine biosynthetic process | IEP | Enrichment |
| MF | GO:0030234 | enzyme regulator activity | IEP | Enrichment |
| BP | GO:0035556 | intracellular signal transduction | IEP | Enrichment |
| MF | GO:0035596 | methylthiotransferase activity | IEP | Enrichment |
| MF | GO:0042802 | identical protein binding | IEP | Enrichment |
| MF | GO:0042803 | protein homodimerization activity | IEP | Enrichment |
| BP | GO:0044272 | sulfur compound biosynthetic process | IEP | Enrichment |
| BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | Enrichment |
| MF | GO:0046983 | protein dimerization activity | IEP | Enrichment |
| MF | GO:0050497 | alkylthioltransferase activity | IEP | Enrichment |
| BP | GO:0050789 | regulation of biological process | IEP | Enrichment |
| BP | GO:0050794 | regulation of cellular process | IEP | Enrichment |
| MF | GO:0060589 | nucleoside-triphosphatase regulator activity | IEP | Enrichment |
| MF | GO:0060590 | ATPase regulator activity | IEP | Enrichment |
| BP | GO:0065007 | biological regulation | IEP | Enrichment |
| MF | GO:0098772 | molecular function regulator | IEP | Enrichment |
| MF | GO:0140299 | small molecule sensor activity | IEP | Enrichment |
| BP | GO:1901605 | alpha-amino acid metabolic process | IEP | Enrichment |
| BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | Enrichment |
| No external refs found! |