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  5. EOD16607

EOD16607


Description : Translation elongation factor EFTu-like, domain 2; Transcription factor, GTP-binding domain; Translation elongation factor EFTu/EF1A, C-terminal [Interproscan].


Gene families : OG_01_0000147 (OrthoFinder) Phylogenetic Tree(s): OG0000147_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD16607
Cluster HCCA: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
Cz02g32220.t1 No alias Translation elongation factor EFTu/EF1A, C-terminal;... 0.03 OrthoFinder
Cz05g24190.t1 No alias Translation elongation factor EFTu/EF1A, C-terminal;... 0.03 OrthoFinder
Cz11g25130.t1 No alias Translation elongation factor EFTu/EF1A, C-terminal;... 0.03 OrthoFinder
Dusal.0036s00015.1 33190426 Transcription factor, GTP-binding domain; Translation... 0.01 OrthoFinder
Dusal.0317s00001.1 33192309 Transcription factor, GTP-binding domain; Translation... 0.02 OrthoFinder
OT_04G01520.1 No alias Translation elongation factor EFTu/EF1A, C-terminal;... 0.02 OrthoFinder
Vocar.0006s0271.1 32894224 Translation elongation factor EFTu/EF1A, C-terminal;... 0.02 OrthoFinder
Vocar.0028s0032.1 32895657 Translation elongation factor EFTu/EF1A, C-terminal;... 0.01 OrthoFinder
XM_002502902.1 MICPUN_91112, 91112 Translation elongation factor EF-1alpha/Tu (TEF1.2) 0.02 OrthoFinder
lcl|LHPG02000010.1_cds_PRW50937.1_1128 PRW50937 Eukaryotic translation elongation factor 1 alpha 2 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
MF GO:0008146 sulfotransferase activity IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
InterPro domains Description Start Stop
IPR004160 Transl_elong_EFTu/EF1A_C 375 481
IPR000795 T_Tr_GTP-bd_dom 56 269
IPR004161 EFTu-like_2 300 364
No external refs found!