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  5. EOD16395

EOD16395


Description : Putative endopeptidase Clp [Ensembl].


Gene families : OG_01_0000040 (OrthoFinder) Phylogenetic Tree(s): OG0000040_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD16395
Cluster HCCA: Cluster_291

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020553.201 tig00020553_g10691.t1 ATP-dependent Clp protease proteolytic subunit 4,... 0.03 OrthoFinder
Cpa|evm.model.tig00020563.155 tig00020563_g11357.t1 Protein degradation.peptidase families.serine-type... 0.03 OrthoFinder
Cpa|evm.model.tig00021522.2 tig00021522_g22096.t1 ATP-dependent Clp protease proteolytic subunit 5,... 0.02 OrthoFinder
Cz01g02300.t1 No alias Clp protease proteolytic subunit... 0.01 OrthoFinder
Cz08g10130.t1 No alias Clp protease proteolytic subunit... 0.01 OrthoFinder
OT_17G01480.1 No alias Clp protease proteolytic subunit... 0.02 OrthoFinder
PTI_04G01800.1 No alias Clp protease proteolytic subunit... 0.01 OrthoFinder
Sro178_g078080.1 Contig275.g3533 Protease proteolytic subunit 0.02 OrthoFinder
Sro20_g014090.1 Contig2954.g23439 Protease proteolytic subunit 0.01 OrthoFinder
Sro22_g015350.1 Contig426.g5759 Protease proteolytic subunit 0.01 OrthoFinder
Transcript_contig_53937 53937 Clp protease proteolytic subunit... 0.01 OrthoFinder
XM_003064166.1 MicpuC2_23295, 23295 Clp protease proteolytic subunit... 0.01 OrthoFinder
lcl|LHPG02000012.1_cds_PRW44960.1_1979 PRW44960 Protease complex subunit 3 0.01 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498561.1_7514 KAA8498561 ATP-dependent Clp protease proteolytic subunit 2 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Enrichment
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP Enrichment
MF GO:0004181 metallocarboxypeptidase activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005787 signal peptidase complex IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006465 signal peptide processing IEP Enrichment
BP GO:0006476 protein deacetylation IEP Enrichment
BP GO:0006486 protein glycosylation IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
BP GO:0006644 phospholipid metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008194 UDP-glycosyltransferase activity IEP Enrichment
MF GO:0008235 metalloexopeptidase activity IEP Enrichment
MF GO:0008375 acetylglucosaminyltransferase activity IEP Enrichment
BP GO:0008610 lipid biosynthetic process IEP Enrichment
BP GO:0008654 phospholipid biosynthetic process IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009235 cobalamin metabolic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
BP GO:0016569 covalent chromatin modification IEP Enrichment
BP GO:0016570 histone modification IEP Enrichment
BP GO:0016575 histone deacetylation IEP Enrichment
MF GO:0016757 glycosyltransferase activity IEP Enrichment
MF GO:0016758 hexosyltransferase activity IEP Enrichment
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
BP GO:0018193 peptidyl-amino acid modification IEP Enrichment
BP GO:0018208 peptidyl-proline modification IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
CC GO:0030880 RNA polymerase complex IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
BP GO:0035601 protein deacylation IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0043413 macromolecule glycosylation IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044255 cellular lipid metabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Enrichment
BP GO:0070085 glycosylation IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0090407 organophosphate biosynthetic process IEP Enrichment
BP GO:0098732 macromolecule deacylation IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1905368 peptidase complex IEP Enrichment
InterPro domains Description Start Stop
IPR023562 ClpP/TepA 56 238
No external refs found!