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Description : Putative Cry-DASH cryptochrome [Ensembl].
Gene families : OG_01_0000085 (OrthoFinder) Phylogenetic Tree(s): OG0000085_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: EOD15451 | |
| Cluster | HCCA: Cluster_75 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00000391.2 | tig00000391_g24833.t1 | DNA damage response.DNA repair... | 0.02 | OrthoFinder | |
| Cpa|evm.model.tig00020965.69 | tig00020965_g16882.t1 | Cryptochrome DASH, chloroplastic/mitochondrial... | 0.04 | OrthoFinder | |
| Cpa|evm.model.tig00020965.70 | tig00020965_g16882.t1 | Cryptochrome DASH, chloroplastic/mitochondrial... | 0.03 | OrthoFinder | |
| Cpa|evm.model.tig00021579.19 | tig00021579_g22443.t1 | Cryptochrome-1 OS=Arabidopsis thaliana | 0.03 | OrthoFinder | |
| Cre02.g078939 | 30785814 | Cryptochrome DASH, chloroplastic/mitochondrial... | 0.09 | OrthoFinder | |
| Cz09g17160.t1 | No alias | DNA photolyase, N-terminal; Cryptochrome/DNA photolyase,... | 0.04 | OrthoFinder | |
| Dusal.0203s00017.1 | 33199258 | Cryptochrome/DNA photolyase, FAD-binding domain; DNA... | 0.01 | OrthoFinder | |
| OT_05G00290.1 | No alias | DNA photolyase, N-terminal; Cryptochrome/DNA photolyase,... | 0.04 | OrthoFinder | |
| OT_15G01070.1 | No alias | DNA photolyase, N-terminal; Cryptochrome/DNA photolyase,... | 0.03 | OrthoFinder | |
| PTI_05G04390.1 | No alias | Cryptochrome/DNA photolyase, FAD-binding domain; DNA... | 0.04 | OrthoFinder | |
| Sro147_g068020.1 | Contig246.g3025 | Cryptochrome DASH, chloroplastic/mitochondrial | 0.01 | OrthoFinder | |
| Sro2726_g335660.1 | Contig3579.g27670 | Cryptochrome DASH | 0.06 | OrthoFinder | |
| Sro580_g170080.1 | Contig2039.g17523 | Deoxyribodipyrimidine photo-lyase | 0.05 | OrthoFinder | |
| Sro82_g043740.1 | Contig4032.g30965 | Cryptochrome-1 | 0.01 | OrthoFinder | |
| TP06G04930.1 | No alias | DNA photolyase, N-terminal; Cryptochrome/DNA photolyase,... | 0.03 | OrthoFinder | |
| Transcript_contig_56266 | 56266 | DNA photolyase, N-terminal; Cryptochrome/DNA photolyase,... | 0.02 | OrthoFinder | |
| Vocar.0002s0198.1 | 32890551 | Cryptochrome/DNA photolyase, FAD-binding domain [Interproscan]. | 0.03 | OrthoFinder | |
| XM_003062934.1 | MicpuC2_22169, 22169 | Cryptochrome/DNA photolyase, FAD-binding domain; DNA... | 0.02 | OrthoFinder | |
| lcl|BLLF01000049.1_cds_GFH06657.1_1134 | HaLaN_01325, GFH06657 | Photolyase/cryptochrome alpha/beta domain-containing protein | 0.03 | OrthoFinder | |
| lcl|BLLF01001067.1_cds_GFH16890.1_11367 | HaLaN_13407, GFH16890 | Deoxyribodipyrimidine photo-lyase | 0.03 | OrthoFinder | |
| lcl|BLLF01001533.1_cds_GFH19868.1_14345 | HaLaN_16893, GFH19868 | Photolyase/cryptochrome alpha/beta domain-containing protein | 0.02 | OrthoFinder | |
| lcl|BLLF01001533.1_cds_GFH19869.1_14346 | HaLaN_16894, GFH19869 | Photolyase/cryptochrome alpha/beta domain-containing protein | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003684 | damaged DNA binding | IEP | Enrichment |
| MF | GO:0003906 | DNA-(apurinic or apyrimidinic site) endonuclease activity | IEP | Enrichment |
| MF | GO:0004175 | endopeptidase activity | IEP | Enrichment |
| MF | GO:0004252 | serine-type endopeptidase activity | IEP | Enrichment |
| MF | GO:0005319 | lipid transporter activity | IEP | Enrichment |
| CC | GO:0005737 | cytoplasm | IEP | Enrichment |
| CC | GO:0005886 | plasma membrane | IEP | Enrichment |
| BP | GO:0006259 | DNA metabolic process | IEP | Enrichment |
| BP | GO:0006281 | DNA repair | IEP | Enrichment |
| BP | GO:0006284 | base-excision repair | IEP | Enrichment |
| BP | GO:0006289 | nucleotide-excision repair | IEP | Enrichment |
| BP | GO:0006508 | proteolysis | IEP | Enrichment |
| BP | GO:0006869 | lipid transport | IEP | Enrichment |
| BP | GO:0006950 | response to stress | IEP | Enrichment |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | Enrichment |
| MF | GO:0008233 | peptidase activity | IEP | Enrichment |
| MF | GO:0008236 | serine-type peptidase activity | IEP | Enrichment |
| MF | GO:0008270 | zinc ion binding | IEP | Enrichment |
| BP | GO:0010207 | photosystem II assembly | IEP | Enrichment |
| BP | GO:0016043 | cellular component organization | IEP | Enrichment |
| MF | GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | IEP | Enrichment |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Enrichment |
| MF | GO:0016799 | hydrolase activity, hydrolyzing N-glycosyl compounds | IEP | Enrichment |
| MF | GO:0017171 | serine hydrolase activity | IEP | Enrichment |
| BP | GO:0033554 | cellular response to stress | IEP | Enrichment |
| BP | GO:0050896 | response to stimulus | IEP | Enrichment |
| MF | GO:0051213 | dioxygenase activity | IEP | Enrichment |
| BP | GO:0051716 | cellular response to stimulus | IEP | Enrichment |
| BP | GO:0061024 | membrane organization | IEP | Enrichment |
| BP | GO:0071702 | organic substance transport | IEP | Enrichment |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | Enrichment |
| BP | GO:0120009 | intermembrane lipid transfer | IEP | Enrichment |
| MF | GO:0120013 | lipid transfer activity | IEP | Enrichment |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Enrichment |
| No external refs found! |