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  5. EOD14985

EOD14985


Description : Adaptor protein 2 beta subunit 1 [Ensembl].


Gene families : OG_01_0000809 (OrthoFinder) Phylogenetic Tree(s): OG0000809_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD14985
Cluster HCCA: Cluster_168

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020592.38 tig00020592_g11671.t1 Vesicle trafficking.clathrin coated vesicle (CCV)... 0.03 OrthoFinder
Cre05.g234665 30783487, AP4B4 Vesicle trafficking.endomembrane trafficking.vacuolar... 0.08 OrthoFinder
Cre11.g478156 30775875 Vesicle trafficking.clathrin coated vesicle (CCV)... 0.07 OrthoFinder
Cz02g23050.t1 No alias Clathrin/coatomer adaptor, adaptin-like, N-terminal;... 0.05 OrthoFinder
Cz14g09210.t1 No alias Clathrin/coatomer adaptor, adaptin-like, N-terminal;... 0.02 OrthoFinder
Dusal.0391s00014.1 33187360 Clathrin/coatomer adaptor, adaptin-like, N-terminal... 0.03 OrthoFinder
Dusal.0611s00004.1 33198402 Beta-adaptin appendage, C-terminal subdomain;... 0.05 OrthoFinder
EOD29886 No alias Adaptor protein complex 1 or 2, subunit beta B [Ensembl]. 0.03 OrthoFinder
PTI_00G04320.1 No alias Beta-adaptin appendage, C-terminal subdomain;... 0.04 OrthoFinder
PTI_13G02480.1 No alias Beta-adaptin appendage, C-terminal subdomain;... 0.02 OrthoFinder
Sro413_g138080.1 Contig3915.g30008 AP-1 complex subunit beta-1 0.05 OrthoFinder
Sro413_g138080.2 No alias Beta-adaptin appendage, C-terminal subdomain [Interproscan]. 0.01 OrthoFinder
Sro951_g223960.1 Contig3277.g25794 AP-1 complex subunit beta-1 0.07 OrthoFinder
TP04G02380.1 No alias Clathrin/coatomer adaptor, adaptin-like, N-terminal;... 0.02 OrthoFinder
TP09G00880.1 No alias Clathrin/coatomer adaptor, adaptin-like, N-terminal;... 0.02 OrthoFinder
Transcript_contig_59442 59442 Clathrin/coatomer adaptor, adaptin-like, N-terminal... 0.02 OrthoFinder
Vocar.0027s0022.1 32887254 Beta-adaptin appendage, C-terminal subdomain;... 0.03 OrthoFinder
XM_002499698.1 MICPUN_55828, 55828 Beta-adaptin appendage, C-terminal subdomain;... 0.02 OrthoFinder
XM_003058041.1 MicpuC2_16312, 16312 Clathrin/coatomer adaptor, adaptin-like, N-terminal... 0.03 OrthoFinder
lcl|BLLF01000741.1_cds_GFH14559.1_9036 HaLaN_10639, GFH14559 B2-adapt-app_C domain-containing protein 0.02 OrthoFinder
lcl|BLLF01000741.1_cds_GFH14560.1_9037 HaLaN_10640, GFH14560 Adaptin_N domain-containing protein 0.02 OrthoFinder
lcl|BLLF01000916.1_cds_GFH15891.1_10368 HaLaN_12212, GFH15891 AP complex subunit beta 0.02 OrthoFinder
lcl|LHPG02000004.1_cds_PRW58911.1_7378 PRW58911 Beta-adaptin A 0.02 OrthoFinder
lcl|VRMN01000009.1_cds_KAA8492396.1_9089 KAA8492396 Beta-adaptin-like protein C 0.01 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
CC GO:0030117 membrane coat IEA Interproscan
CC GO:0030131 clathrin adaptor complex IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Enrichment
MF GO:0000166 nucleotide binding IEP Enrichment
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005963 magnesium-dependent protein serine/threonine phosphatase complex IEP Enrichment
BP GO:0005984 disaccharide metabolic process IEP Enrichment
BP GO:0005991 trehalose metabolic process IEP Enrichment
BP GO:0005992 trehalose biosynthetic process IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0006904 vesicle docking involved in exocytosis IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
CC GO:0008287 protein serine/threonine phosphatase complex IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
BP GO:0009311 oligosaccharide metabolic process IEP Enrichment
BP GO:0009312 oligosaccharide biosynthetic process IEP Enrichment
MF GO:0015035 protein-disulfide reductase activity IEP Enrichment
MF GO:0015036 disulfide oxidoreductase activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
MF GO:0017069 snRNA binding IEP Enrichment
MF GO:0017070 U6 snRNA binding IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0019888 protein phosphatase regulator activity IEP Enrichment
BP GO:0022406 membrane docking IEP Enrichment
CC GO:0030120 vesicle coat IEP Enrichment
CC GO:0030126 COPI vesicle coat IEP Enrichment
MF GO:0030246 carbohydrate binding IEP Enrichment
MF GO:0030247 polysaccharide binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0030623 U5 snRNA binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0046351 disaccharide biosynthetic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
MF GO:0046912 acyltransferase, acyl groups converted into alkyl on transfer IEP Enrichment
BP GO:0048278 vesicle docking IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
BP GO:0051640 organelle localization IEP Enrichment
MF GO:0070569 uridylyltransferase activity IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
BP GO:0140029 exocytic process IEP Enrichment
BP GO:0140056 organelle localization by membrane tethering IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
CC GO:1903293 phosphatase complex IEP Enrichment
MF GO:2001070 starch binding IEP Enrichment
InterPro domains Description Start Stop
IPR015151 B-adaptin_app_sub_C 822 929
IPR002553 Clathrin/coatomer_adapt-like_N 31 552
No external refs found!