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  5. Cpa|evm.model.tig00020952.7

Cpa|evm.model.tig00020952.7 (tig00020952_g16473.t1)


Aliases : tig00020952_g16473.t1

Description : ABC transporter B family member 2 OS=Arabidopsis thaliana


Gene families : OG_01_0000036 (OrthoFinder) Phylogenetic Tree(s): OG0000036_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020952.7
Cluster HCCA: Cluster_135

Target Alias Description ECC score Gene Family Method Actions
Cre17.g725150 30782210 ABC transporter B family member 7 OS=Arabidopsis thaliana 0.01 OrthoFinder
Cre17.g725200 30782751 ABC transporter B family member 12 OS=Arabidopsis thaliana 0.02 OrthoFinder
Dusal.0274s00010.1 33185624 ABC transporter type 1, transmembrane domain [Interproscan]. 0.02 OrthoFinder
Dusal.0407s00010.1 33197898 ABC transporter-like; ABC transporter type 1,... 0.03 OrthoFinder
Dusal.1005s00005.1 33195266 ABC transporter-like; ABC transporter type 1,... 0.02 OrthoFinder
EOD11711 No alias Putative ABC transporter [Ensembl]. 0.03 OrthoFinder
EOD14122 No alias Putative ABC transporter [Ensembl]. 0.01 OrthoFinder
EOD22205 No alias Putative ABC transporter [Ensembl]. 0.01 OrthoFinder
EOD22725 No alias Putative ABC transporter [Ensembl]. 0.01 OrthoFinder
EOD31963 No alias Putative ABC transporter [Ensembl]. 0.01 OrthoFinder
EOD35541 No alias Putative ABC transporter [Ensembl]. 0.05 OrthoFinder
PTI_00G03030.1 No alias ABC transporter type 1, transmembrane domain; ABC... 0.01 OrthoFinder
Sro1631_g287230.1 Contig2461.g20146 Leptomycin B resistance protein pmd1 0.01 OrthoFinder
TP18G00380.1 No alias ABC transporter-like; ABC transporter type 1,... 0.01 OrthoFinder
lcl|LHPG02000003.1_cds_PRW60050.1_6327 PRW60050 ATP-binding cassette sub-family B member 9 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP Enrichment
MF GO:0004185 serine-type carboxypeptidase activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006869 lipid transport IEP Enrichment
BP GO:0007009 plasma membrane organization IEP Enrichment
MF GO:0015399 primary active transmembrane transporter activity IEP Enrichment
BP GO:0015748 organophosphate ester transport IEP Enrichment
BP GO:0015914 phospholipid transport IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
BP GO:0017038 protein import IEP Enrichment
BP GO:0017121 plasma membrane phospholipid scrambling IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
MF GO:0030151 molybdenum ion binding IEP Enrichment
MF GO:0031072 heat shock protein binding IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
BP GO:0034204 lipid translocation IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Enrichment
BP GO:0045332 phospholipid translocation IEP Enrichment
BP GO:0051179 localization IEP Enrichment
MF GO:0051213 dioxygenase activity IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0061024 membrane organization IEP Enrichment
MF GO:0070008 serine-type exopeptidase activity IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
BP GO:0097035 regulation of membrane lipid distribution IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
BP GO:0120009 intermembrane lipid transfer IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 321 395
No external refs found!