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  5. Cpa|evm.model.tig00020952.49

Cpa|evm.model.tig00020952.49 (tig00020952_g16507.t1)


Aliases : tig00020952_g16507.t1

Description : Protein degradation.peptidase families.serine-type peptidase activities.chloroplast Clp-type protease complex.ClpR non-proteolytic core component


Gene families : OG_01_0000040 (OrthoFinder) Phylogenetic Tree(s): OG0000040_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020952.49
Cluster HCCA: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
Cz01g02300.t1 No alias Clp protease proteolytic subunit... 0.01 OrthoFinder
EOD14390 No alias Putative endopeptidase Clp [Ensembl]. 0.01 OrthoFinder
OT_02G01220.1 No alias Clp protease proteolytic subunit... 0.02 OrthoFinder
OT_09G02930.1 No alias Clp protease proteolytic subunit... 0.01 OrthoFinder
OT_17G01480.1 No alias Clp protease proteolytic subunit... 0.02 OrthoFinder
PTI_03G00950.1 No alias Clp protease proteolytic subunit... 0.03 OrthoFinder
PTI_04G01800.1 No alias Clp protease proteolytic subunit... 0.03 OrthoFinder
PTI_15G00750.1 No alias Clp protease proteolytic subunit... 0.02 OrthoFinder
Sro178_g078080.1 Contig275.g3533 Protease proteolytic subunit 0.02 OrthoFinder
Sro20_g014090.1 Contig2954.g23439 Protease proteolytic subunit 0.01 OrthoFinder
Sro22_g015350.1 Contig426.g5759 Protease proteolytic subunit 0.02 OrthoFinder
Transcript_contig_53937 53937 Clp protease proteolytic subunit... 0.01 OrthoFinder
Transcript_contig_56182 56182 Clp protease proteolytic subunit... 0.02 OrthoFinder
Vocar.0004s0241.1 32890012 Clp protease proteolytic subunit... 0.01 OrthoFinder
Vocar.0006s0234.1 32894393 Clp protease proteolytic subunit... 0.02 OrthoFinder
XM_002507019.1 MICPUN_107465, 107465 Clp protease proteolytic subunit... 0.01 OrthoFinder
XM_003064166.1 MicpuC2_23295, 23295 Clp protease proteolytic subunit... 0.01 OrthoFinder
lcl|BLLF01000889.1_cds_GFH15715.1_10192 HaLaN_11995, GFH15715 ATP-dependent Clp protease proteolytic subunit 0.01 OrthoFinder
lcl|BLLF01001574.1_cds_GFH20100.1_14577 HaLaN_17169, GFH20100 ATP-dependent Clp protease proteolytic subunit 0.01 OrthoFinder
lcl|LHPG02000019.1_cds_PRW32599.1_4114 PRW32599 ATP-dependent Clp protease proteolytic subunit-related... 0.02 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498561.1_7514 KAA8498561 ATP-dependent Clp protease proteolytic subunit 2 0.01 OrthoFinder
lcl|VRMN01000011.1_cds_KAA8492008.1_5016 KAA8492008 ATP-dependent Clp protease proteolytic subunit 1 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Enrichment
MF GO:0003954 NADH dehydrogenase activity IEP Enrichment
MF GO:0003955 NAD(P)H dehydrogenase (quinone) activity IEP Enrichment
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
MF GO:0004665 prephenate dehydrogenase (NADP+) activity IEP Enrichment
CC GO:0005743 mitochondrial inner membrane IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006479 protein methylation IEP Enrichment
BP GO:0006480 N-terminal protein amino acid methylation IEP Enrichment
BP GO:0006570 tyrosine metabolic process IEP Enrichment
BP GO:0006571 tyrosine biosynthetic process IEP Enrichment
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0008213 protein alkylation IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
MF GO:0008977 prephenate dehydrogenase (NAD+) activity IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
BP GO:0009072 aromatic amino acid family metabolic process IEP Enrichment
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Enrichment
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Enrichment
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Enrichment
MF GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors IEP Enrichment
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Enrichment
CC GO:0019866 organelle inner membrane IEP Enrichment
BP GO:0031365 N-terminal protein amino acid modification IEP Enrichment
CC GO:0031966 mitochondrial membrane IEP Enrichment
BP GO:0032259 methylation IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0043414 macromolecule methylation IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Enrichment
BP GO:1901607 alpha-amino acid biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR023562 ClpP/TepA 63 217
No external refs found!