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Description : PDZ domain [Interproscan].
Gene families : OG_01_0008095 (OrthoFinder) Phylogenetic Tree(s): OG0008095_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: EOD14039 | |
| Cluster | HCCA: Cluster_216 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| PTI_08G04430.1 | No alias | PDZ domain 6 [Interproscan]. | 0.02 | OrthoFinder | |
| PTI_21G02000.1 | No alias | PDZ domain [Interproscan]. | 0.03 | OrthoFinder | |
| Sro466_g148880.1 | Contig1164.g11107 | PDZ domain [Interproscan]. | 0.07 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004175 | endopeptidase activity | IEP | Enrichment |
| MF | GO:0004222 | metalloendopeptidase activity | IEP | Enrichment |
| MF | GO:0004392 | heme oxygenase (decyclizing) activity | IEP | Enrichment |
| MF | GO:0005509 | calcium ion binding | IEP | Enrichment |
| BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0006788 | heme oxidation | IEP | Enrichment |
| CC | GO:0009507 | chloroplast | IEP | Enrichment |
| CC | GO:0009536 | plastid | IEP | Enrichment |
| BP | GO:0010207 | photosystem II assembly | IEP | Enrichment |
| BP | GO:0015979 | photosynthesis | IEP | Enrichment |
| BP | GO:0016043 | cellular component organization | IEP | Enrichment |
| MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | Enrichment |
| BP | GO:0022607 | cellular component assembly | IEP | Enrichment |
| BP | GO:0033013 | tetrapyrrole metabolic process | IEP | Enrichment |
| BP | GO:0034622 | cellular protein-containing complex assembly | IEP | Enrichment |
| BP | GO:0042168 | heme metabolic process | IEP | Enrichment |
| BP | GO:0042440 | pigment metabolic process | IEP | Enrichment |
| BP | GO:0043933 | protein-containing complex subunit organization | IEP | Enrichment |
| MF | GO:0046422 | violaxanthin de-epoxidase activity | IEP | Enrichment |
| BP | GO:0065003 | protein-containing complex assembly | IEP | Enrichment |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001478 | PDZ | 98 | 163 |
| No external refs found! |