Cpa|evm.model.tig00020943.57 (tig00020943_g16300.t1)


Aliases : tig00020943_g16300.t1

Description : Ethylene receptor OS=Malus domestica


Gene families : OG_01_0000006 (OrthoFinder) Phylogenetic Tree(s): OG0000006_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020943.57
Cluster HCCA: Cluster_174

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000042.236 tig00000042_g15634.t1 Probable histidine kinase 3 OS=Oryza sativa subsp. indica 0.06 OrthoFinder
Cpa|evm.model.tig00000157.108 tig00000157_g9707.t1 Ethylene receptor 1 OS=Arabidopsis thaliana 0.04 OrthoFinder
Cpa|evm.model.tig00000190.40 tig00000190_g13861.t1 Ethylene receptor OS=Nicotiana tabacum 0.05 OrthoFinder
Cpa|evm.model.tig00000254.26 tig00000254_g22474.t1 Ethylene receptor 1 OS=Brassica oleracea 0.04 OrthoFinder
Cpa|evm.model.tig00000403.48 tig00000403_g305.t1 Ethylene response sensor 1 OS=Arabidopsis thaliana 0.05 OrthoFinder
Cpa|evm.model.tig00000480.52 tig00000480_g1320.t1 Histidine kinase 4 OS=Arabidopsis thaliana 0.03 OrthoFinder
Cpa|evm.model.tig00000605.24 tig00000605_g2490.t1 No description available 0.04 OrthoFinder
Cpa|evm.model.tig00000792.33 tig00000792_g4184.t1 Probable histidine kinase 6 OS=Oryza sativa subsp. japonica 0.03 OrthoFinder
Cpa|evm.model.tig00001224.9 tig00001224_g7632.t1 Histidine kinase 5 OS=Arabidopsis thaliana 0.04 OrthoFinder
Cpa|evm.model.tig00020553.260 tig00020553_g10746.t1 Probable histidine kinase 6 OS=Oryza sativa subsp. japonica 0.06 OrthoFinder
Cpa|evm.model.tig00020554.106 tig00020554_g10883.t2 No description available 0.03 OrthoFinder
Cpa|evm.model.tig00020629.10 tig00020629_g12331.t1 Probable histidine kinase 3 OS=Oryza sativa subsp. indica 0.03 OrthoFinder
Cpa|evm.model.tig00020660.25 tig00021501_g21945.t1 Probable histidine kinase 3 OS=Oryza sativa subsp. indica 0.01 OrthoFinder
Cpa|evm.model.tig00020704.6 tig00020704_g13147.t1 Histidine kinase 5 OS=Arabidopsis thaliana 0.03 OrthoFinder
Cpa|evm.model.tig00020934.42 tig00020934_g16110.t1 Ethylene receptor 1 OS=Solanum lycopersicum 0.04 OrthoFinder
Cpa|evm.model.tig00021137.20 tig00021137_g18985.t1 Ethylene receptor 1 OS=Arabidopsis thaliana 0.04 OrthoFinder
Cpa|evm.model.tig00021179.53 tig00021179_g19270.t1 Probable histidine kinase 5 OS=Oryza sativa subsp. japonica 0.03 OrthoFinder
Cre16.g678900 30778058 No description available 0.01 OrthoFinder
XM_003064490.1 MicpuC2_10373, 10373 Signal transduction response regulator, receiver domain;... 0.02 OrthoFinder
lcl|BLLF01000478.1_cds_GFH12211.1_6688 HaLaN_07851, GFH12211 Signal transduction histidine kinase,... 0.01 OrthoFinder
lcl|BLLF01000561.1_cds_GFH12981.1_7458 HaLaN_08775, GFH12981 Signal transduction histidine kinase,... 0.02 OrthoFinder
lcl|BLLF01000788.1_cds_GFH14961.1_9438 HaLaN_11105, GFH14961 Signal transduction histidine kinase,... 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEA Interproscan
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
BP GO:0007165 signal transduction IEA Interproscan
BP GO:0009584 detection of visible light IEA Interproscan
BP GO:0018298 protein-chromophore linkage IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000030 mannosyltransferase activity IEP Enrichment
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Enrichment
BP GO:0000271 polysaccharide biosynthetic process IEP Enrichment
BP GO:0002097 tRNA wobble base modification IEP Enrichment
BP GO:0002098 tRNA wobble uridine modification IEP Enrichment
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Enrichment
BP GO:0005976 polysaccharide metabolic process IEP Enrichment
BP GO:0006073 cellular glucan metabolic process IEP Enrichment
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Enrichment
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
BP GO:0006486 protein glycosylation IEP Enrichment
MF GO:0008194 UDP-glycosyltransferase activity IEP Enrichment
BP GO:0009250 glucan biosynthetic process IEP Enrichment
MF GO:0016757 glycosyltransferase activity IEP Enrichment
MF GO:0016758 hexosyltransferase activity IEP Enrichment
BP GO:0017013 protein flavinylation IEP Enrichment
CC GO:0033588 elongator holoenzyme complex IEP Enrichment
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Enrichment
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Enrichment
MF GO:0035251 UDP-glucosyltransferase activity IEP Enrichment
BP GO:0043413 macromolecule glycosylation IEP Enrichment
BP GO:0044042 glucan metabolic process IEP Enrichment
BP GO:0044262 cellular carbohydrate metabolic process IEP Enrichment
BP GO:0044264 cellular polysaccharide metabolic process IEP Enrichment
MF GO:0046527 glucosyltransferase activity IEP Enrichment
BP GO:0051273 beta-glucan metabolic process IEP Enrichment
BP GO:0051274 beta-glucan biosynthetic process IEP Enrichment
BP GO:0070085 glycosylation IEP Enrichment
CC GO:0098797 plasma membrane protein complex IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
InterPro domains Description Start Stop
IPR001789 Sig_transdc_resp-reg_receiver 1104 1222
IPR013515 Phytochrome_cen-reg 431 565
IPR003661 HisK_dim/P 811 876
IPR013654 PAS_2 31 96
IPR003594 HATPase_C 923 1029
IPR003018 GAF 208 347
No external refs found!