EOD12092

Description : ABC transporter type 1, transmembrane domain; ABC transporter-like [Interproscan].

Gene families : OG_01_0000039 (OrthoFinder) Phylogenetic Tree(s): OG0000039_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: EOD12092
Cluster	HCCA: Cluster_84

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00000718.1	tig00000718_g3679.t1	ABC transporter C family member 2 OS=Arabidopsis thaliana	0.01	OrthoFinder
Cpa\|evm.model.tig00000718.2	tig00000718_g3679.t1	ABC transporter C family member 2 OS=Arabidopsis thaliana	0.01	OrthoFinder
Cpa\|evm.model.tig00000718.3	tig00000718_g3679.t1	ABC transporter C family member 6 OS=Arabidopsis thaliana	0.01	OrthoFinder
Cpa\|evm.model.tig00001024.2	tig00001729_g9740.t1	ABC transporter C family member 14 OS=Arabidopsis thaliana	0.01	OrthoFinder
Cpa\|evm.model.tig00001729.6	tig00001729_g9740.t1	Solute transport.primary active transport.ABC...	0.01	OrthoFinder
Cpa\|evm.model.tig00020592.4	tig00020592_g11633.t1	ABC transporter C family member 1 OS=Arabidopsis thaliana	0.01	OrthoFinder
Cpa\|evm.model.tig00020723.5	tig00020723_g13424.t1	ABC transporter C family member 13 OS=Arabidopsis thaliana	0.02	OrthoFinder
Cre04.g228650	30791460	Solute transport.primary active transport.ABC...	0.02	OrthoFinder
Dusal.0432s00003.1	33197469	ABC transporter-like; ABC transporter type 1,...	0.01	OrthoFinder
Dusal.0852s00004.1	33185428	ABC transporter-like; ABC transporter type 1,...	0.02	OrthoFinder
Sro200_g084620.1	Contig201.g2353	Oligomycin resistance ATP-dependent permease YOR1	0.03	OrthoFinder
Sro61_g035030.1	Contig3112.g24756	Multiple drug resistance-associated protein-like transporter 1	0.04	OrthoFinder
Transcript_contig_56405	56405	ABC transporter type 1, transmembrane domain; ABC...	0.01	OrthoFinder
lcl\|BLLF01002022.1_cds_GFH22355.1_16832	HaLaN_19808, GFH22355	ABC transporter type 1, transmembrane domain [Interproscan].	0.01	OrthoFinder
lcl\|LHPG02000001.1_cds_PRW61038.1_93	PRW61038	Multidrug resistance-associated 1 isoform X8	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
CC	GO:0016021	integral component of membrane	IEA	Interproscan
MF	GO:0016887	ATPase	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003857	3-hydroxyacyl-CoA dehydrogenase activity	IEP	Enrichment
MF	GO:0004420	hydroxymethylglutaryl-CoA reductase (NADPH) activity	IEP	Enrichment
BP	GO:0006163	purine nucleotide metabolic process	IEP	Enrichment
BP	GO:0006631	fatty acid metabolic process	IEP	Enrichment
MF	GO:0008080	N-acetyltransferase activity	IEP	Enrichment
MF	GO:0008410	CoA-transferase activity	IEP	Enrichment
BP	GO:0009150	purine ribonucleotide metabolic process	IEP	Enrichment
BP	GO:0009259	ribonucleotide metabolic process	IEP	Enrichment
BP	GO:0015936	coenzyme A metabolic process	IEP	Enrichment
MF	GO:0016410	N-acyltransferase activity	IEP	Enrichment
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	Enrichment
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	Enrichment
MF	GO:0016782	transferase activity, transferring sulphur-containing groups	IEP	Enrichment
BP	GO:0019693	ribose phosphate metabolic process	IEP	Enrichment
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	Enrichment
BP	GO:0033865	nucleoside bisphosphate metabolic process	IEP	Enrichment
BP	GO:0033875	ribonucleoside bisphosphate metabolic process	IEP	Enrichment
BP	GO:0034032	purine nucleoside bisphosphate metabolic process	IEP	Enrichment
BP	GO:0044281	small molecule metabolic process	IEP	Enrichment
BP	GO:0072521	purine-containing compound metabolic process	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR011527	ABC1_TM_dom	317	515
IPR003439	ABC_transporter-like_ATP-bd	1	136
IPR003439	ABC_transporter-like_ATP-bd	615	763

External Links

No external refs found!

EOD12092

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation