Description : Putative ABC transporter [Ensembl].
Gene families : OG_01_0000036 (OrthoFinder) Phylogenetic Tree(s): OG0000036_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: EOD11253 | |
Cluster | HCCA: Cluster_259 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cz07g26080.t1 | No alias | ABC transporter type 1, transmembrane domain; ABC... | 0.02 | OrthoFinder | |
Dusal.1095s00001.1 | 33197946 | ABC transporter-like; ABC transporter type 1,... | 0.01 | OrthoFinder | |
Transcript_contig_89223 | 89223 | ABC transporter type 1, transmembrane domain; ABC... | 0.01 | OrthoFinder | |
XM_002505231.1 | MICPUN_75054, 75054 | ATP-binding cassette superfamily | 0.02 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005524 | ATP binding | IEA | Interproscan |
CC | GO:0016021 | integral component of membrane | IEA | Interproscan |
MF | GO:0016887 | ATPase | IEA | Interproscan |
MF | GO:0042626 | ATPase-coupled transmembrane transporter activity | IEA | Interproscan |
BP | GO:0055085 | transmembrane transport | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004386 | helicase activity | IEP | Enrichment |
MF | GO:0008270 | zinc ion binding | IEP | Enrichment |
MF | GO:0016706 | 2-oxoglutarate-dependent dioxygenase activity | IEP | Enrichment |
MF | GO:0016814 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines | IEP | Enrichment |
MF | GO:0030246 | carbohydrate binding | IEP | Enrichment |
MF | GO:0031406 | carboxylic acid binding | IEP | Enrichment |
MF | GO:0031418 | L-ascorbic acid binding | IEP | Enrichment |
BP | GO:0034622 | cellular protein-containing complex assembly | IEP | Enrichment |
MF | GO:0043169 | cation binding | IEP | Enrichment |
MF | GO:0043177 | organic acid binding | IEP | Enrichment |
BP | GO:0043248 | proteasome assembly | IEP | Enrichment |
MF | GO:0046872 | metal ion binding | IEP | Enrichment |
MF | GO:0046914 | transition metal ion binding | IEP | Enrichment |
MF | GO:0048029 | monosaccharide binding | IEP | Enrichment |
MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | Enrichment |
MF | GO:0051213 | dioxygenase activity | IEP | Enrichment |
No external refs found! |