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  5. EOD10350

EOD10350


Description : PRO8NT domain [Interproscan].


Gene families : OG_01_0001747 (OrthoFinder) Phylogenetic Tree(s): OG0001747_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD10350
Cluster HCCA: Cluster_86

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000093.136 tig00000093_g3562.t1 Pre-mRNA-processing-splicing factor 8A OS=Arabidopsis thaliana 0.02 OrthoFinder
Cpa|evm.model.tig00000093.137 tig00000093_g3562.t1 RNA processing.RNA splicing.U2-type-intron-specific... 0.02 OrthoFinder
Cre01.g016050 30789071, PRP8 RNA processing.RNA splicing.U2-type-intron-specific... 0.01 OrthoFinder
lcl|BLLF01000102.1_cds_GFH07545.1_2022 HaLaN_02363, GFH07545 MPN domain-containing protein 0.02 OrthoFinder
lcl|BLLF01001484.1_cds_GFH19559.1_14036 HaLaN_16522, GFH19559 MPN domain-containing protein 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0000398 mRNA splicing, via spliceosome IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
BP GO:0007155 cell adhesion IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
MF GO:0017069 snRNA binding IEP Enrichment
MF GO:0017070 U6 snRNA binding IEP Enrichment
BP GO:0022610 biological adhesion IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
MF GO:0030623 U5 snRNA binding IEP Enrichment
InterPro domains Description Start Stop
IPR012591 PRO8NT 142 227
No external refs found!