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  5. Cpa|evm.model.tig00020934.42

Cpa|evm.model.tig00020934.42 (tig00020934_g16110.t1)


Aliases : tig00020934_g16110.t1

Description : Ethylene receptor 1 OS=Solanum lycopersicum


Gene families : OG_01_0000006 (OrthoFinder) Phylogenetic Tree(s): OG0000006_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020934.42
Cluster HCCA: Cluster_174

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020553.260 tig00020553_g10746.t1 Probable histidine kinase 6 OS=Oryza sativa subsp. japonica 0.03 OrthoFinder
Cpa|evm.model.tig00020943.57 tig00020943_g16300.t1 Ethylene receptor OS=Malus domestica 0.04 OrthoFinder
Cre07.g329900 30775034 Histidine kinase 5 OS=Arabidopsis thaliana 0.01 OrthoFinder
OT_09G02140.1 No alias Histidine kinase/HSP90-like ATPase; PAS domain; Signal... 0.02 OrthoFinder
Sro1435_g272380.1 Contig4058.g31114 Hybrid signal transduction histidine kinase J 0.01 OrthoFinder
Transcript_contig_89432 89432 Archaeal/bacterial/fungal rhodopsins; Histidine... 0.01 OrthoFinder
lcl|BLLF01000561.1_cds_GFH12981.1_7458 HaLaN_08775, GFH12981 Signal transduction histidine kinase,... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEA Interproscan
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005643 nuclear pore IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0017056 structural constituent of nuclear pore IEP Enrichment
BP GO:0018298 protein-chromophore linkage IEP Enrichment
InterPro domains Description Start Stop
IPR003594 HATPase_C 456 571
IPR001789 Sig_transdc_resp-reg_receiver 832 940
IPR003661 HisK_dim/P 343 410
No external refs found!