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  5. EOD09836

EOD09836


Description : Light harvesting protein [Ensembl].


Gene families : OG_01_0000076 (OrthoFinder) Phylogenetic Tree(s): OG0000076_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD09836
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
Cz16g02040.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
PTI_02G04020.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
PTI_04G04620.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.01 OrthoFinder
Sro122_g059170.1 Contig71.g736 Chloroplastic 0.01 OrthoFinder
Sro132_g062570.1 Contig2745.g22100 Chloroplastic 0.01 OrthoFinder
Sro1347_g264950.1 Contig4640.g34581 B binding protein 6, chloroplastic 0.01 OrthoFinder
Sro1430_g271970.1 Contig4579.g34184 B binding protein L1818, chloroplastic 0.02 OrthoFinder
Sro149_g068330.1 Contig259.g3201 Chloroplastic 0.02 OrthoFinder
Sro149_g068340.1 Contig259.g3202 B binding protein L1818, chloroplastic 0.02 OrthoFinder
Sro1506_g278310.1 Contig3888.g29862 Chloroplastic 0.02 OrthoFinder
Sro2423_g327210.1 Contig3569.g27581 Chloroplastic 0.03 OrthoFinder
Sro412_g137900.1 Contig2922.g23262 Chloroplastic 0.03 OrthoFinder
Sro60_g034620.1 Contig797.g8939 Chloroplastic 0.02 OrthoFinder
Sro652_g181650.1 Contig2024.g17318 Chloroplastic 0.01 OrthoFinder
Sro656_g182410.1 Contig256.g3152 Chloroplastic 0.02 OrthoFinder
Sro698_g189300.1 Contig480.g6500 Chlorophyll a 0.01 OrthoFinder
Sro698_g189330.1 Contig480.g6503 Chloroplastic 0.01 OrthoFinder
Sro829_g208070.1 Contig1016.g10166 Chloroplastic 0.01 OrthoFinder
Sro844_g209920.1 Contig403.g5457 Chloroplastic 0.02 OrthoFinder
TP01G11130.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
TP05G05630.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
TP19G02190.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
TP23G01270.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01002748.1_cds_GFH25200.1_19677 HaLaN_23126, GFH25200 Chlorophyll a-b binding protein, chloroplastic 0.01 OrthoFinder
lcl|VRMN01000009.1_cds_KAA8492420.1_9113 KAA8492420 Chlorophyll a-b binding protein 1B-21, chloroplastic 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP Enrichment
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
MF GO:0004392 heme oxygenase (decyclizing) activity IEP Enrichment
MF GO:0004635 phosphoribosyl-AMP cyclohydrolase activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005576 extracellular region IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006547 histidine metabolic process IEP Enrichment
BP GO:0006771 riboflavin metabolic process IEP Enrichment
BP GO:0006778 porphyrin-containing compound metabolic process IEP Enrichment
BP GO:0006788 heme oxidation IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009231 riboflavin biosynthetic process IEP Enrichment
CC GO:0009349 riboflavin synthase complex IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Enrichment
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Enrichment
BP GO:0017038 protein import IEP Enrichment
MF GO:0019238 cyclohydrolase activity IEP Enrichment
MF GO:0030246 carbohydrate binding IEP Enrichment
MF GO:0030247 polysaccharide binding IEP Enrichment
MF GO:0030248 cellulose binding IEP Enrichment
MF GO:0031072 heat shock protein binding IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0042168 heme metabolic process IEP Enrichment
BP GO:0042440 pigment metabolic process IEP Enrichment
BP GO:0042726 flavin-containing compound metabolic process IEP Enrichment
BP GO:0042727 flavin-containing compound biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0044283 small molecule biosynthetic process IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 56 206
No external refs found!