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Description : Light harvesting protein [Ensembl].
Gene families : OG_01_0000076 (OrthoFinder) Phylogenetic Tree(s): OG0000076_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: EOD06468 | |
| Cluster | HCCA: Cluster_10 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre08.g365900 | 30773702, LHCSR1 | Photosynthesis.photophosphorylation.photosystem... | 0.03 | OrthoFinder | |
| Cz16g02040.t1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.01 | OrthoFinder | |
| EOD25053 | No alias | Light-harvesting family [Ensembl]. | 0.03 | OrthoFinder | |
| PTI_01G10030.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| PTI_02G04020.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.03 | OrthoFinder | |
| PTI_04G04620.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.01 | OrthoFinder | |
| PTI_05G00320.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| PTI_14G03460.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| Sro122_g059170.1 | Contig71.g736 | Chloroplastic | 0.02 | OrthoFinder | |
| Sro132_g062570.1 | Contig2745.g22100 | Chloroplastic | 0.02 | OrthoFinder | |
| Sro1347_g264950.1 | Contig4640.g34581 | B binding protein 6, chloroplastic | 0.01 | OrthoFinder | |
| Sro1430_g271970.1 | Contig4579.g34184 | B binding protein L1818, chloroplastic | 0.03 | OrthoFinder | |
| Sro149_g068330.1 | Contig259.g3201 | Chloroplastic | 0.03 | OrthoFinder | |
| Sro149_g068340.1 | Contig259.g3202 | B binding protein L1818, chloroplastic | 0.03 | OrthoFinder | |
| Sro1506_g278310.1 | Contig3888.g29862 | Chloroplastic | 0.02 | OrthoFinder | |
| Sro2423_g327210.1 | Contig3569.g27581 | Chloroplastic | 0.03 | OrthoFinder | |
| Sro288_g108750.1 | Contig62.g495 | B binding protein L1818, chloroplastic | 0.02 | OrthoFinder | |
| Sro412_g137900.1 | Contig2922.g23262 | Chloroplastic | 0.03 | OrthoFinder | |
| Sro60_g034620.1 | Contig797.g8939 | Chloroplastic | 0.03 | OrthoFinder | |
| Sro652_g181650.1 | Contig2024.g17318 | Chloroplastic | 0.01 | OrthoFinder | |
| Sro656_g182410.1 | Contig256.g3152 | Chloroplastic | 0.03 | OrthoFinder | |
| Sro698_g189300.1 | Contig480.g6500 | Chlorophyll a | 0.01 | OrthoFinder | |
| Sro698_g189330.1 | Contig480.g6503 | Chloroplastic | 0.01 | OrthoFinder | |
| Sro829_g208070.1 | Contig1016.g10166 | Chloroplastic | 0.01 | OrthoFinder | |
| Sro844_g209920.1 | Contig403.g5457 | Chloroplastic | 0.02 | OrthoFinder | |
| TP01G11130.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.03 | OrthoFinder | |
| TP05G05630.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| TP19G02190.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.03 | OrthoFinder | |
| TP23G01260.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| TP23G01270.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| TP23G01280.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| lcl|BLLF01002748.1_cds_GFH25200.1_19677 | HaLaN_23126, GFH25200 | Chlorophyll a-b binding protein, chloroplastic | 0.01 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000105 | histidine biosynthetic process | IEP | Enrichment |
| MF | GO:0003735 | structural constituent of ribosome | IEP | Enrichment |
| MF | GO:0004222 | metalloendopeptidase activity | IEP | Enrichment |
| MF | GO:0004392 | heme oxygenase (decyclizing) activity | IEP | Enrichment |
| MF | GO:0004635 | phosphoribosyl-AMP cyclohydrolase activity | IEP | Enrichment |
| MF | GO:0005198 | structural molecule activity | IEP | Enrichment |
| CC | GO:0005840 | ribosome | IEP | Enrichment |
| BP | GO:0006412 | translation | IEP | Enrichment |
| BP | GO:0006518 | peptide metabolic process | IEP | Enrichment |
| BP | GO:0006547 | histidine metabolic process | IEP | Enrichment |
| BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0006788 | heme oxidation | IEP | Enrichment |
| BP | GO:0008104 | protein localization | IEP | Enrichment |
| MF | GO:0008237 | metallopeptidase activity | IEP | Enrichment |
| BP | GO:0009058 | biosynthetic process | IEP | Enrichment |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:0015031 | protein transport | IEP | Enrichment |
| MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | Enrichment |
| MF | GO:0016814 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines | IEP | Enrichment |
| BP | GO:0017038 | protein import | IEP | Enrichment |
| MF | GO:0019238 | cyclohydrolase activity | IEP | Enrichment |
| BP | GO:0019538 | protein metabolic process | IEP | Enrichment |
| BP | GO:0033036 | macromolecule localization | IEP | Enrichment |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:0042168 | heme metabolic process | IEP | Enrichment |
| BP | GO:0042440 | pigment metabolic process | IEP | Enrichment |
| BP | GO:0043043 | peptide biosynthetic process | IEP | Enrichment |
| CC | GO:0043226 | organelle | IEP | Enrichment |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | Enrichment |
| CC | GO:0043229 | intracellular organelle | IEP | Enrichment |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Enrichment |
| BP | GO:0043603 | cellular amide metabolic process | IEP | Enrichment |
| BP | GO:0043604 | amide biosynthetic process | IEP | Enrichment |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Enrichment |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Enrichment |
| BP | GO:0045184 | establishment of protein localization | IEP | Enrichment |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Enrichment |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR022796 | Chloroa_b-bind | 56 | 206 |
| No external refs found! |