1. Home
  2. Species
  3. Emiliania huxleyi
  4. Sequence
  5. EOD04811

EOD04811


Description : ATP-dependent metalloprotease FtsH [Ensembl].


Gene families : OG_01_0000075 (OrthoFinder) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD04811
Cluster HCCA: Cluster_230

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021127.121 tig00021127_g18802.t1 ATP-dependent zinc metalloprotease FTSH 5, chloroplastic... 0.01 OrthoFinder
Cz03g27160.t1 No alias ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain;... 0.02 OrthoFinder
PTI_01G04910.1 No alias AAA ATPase, AAA+ lid domain; ATPase, AAA-type, core;... 0.02 OrthoFinder
Transcript_contig_54885 54885 Peptidase M41; ATPase, AAA-type, core; AAA ATPase, AAA+... 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006508 proteolysis IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0030976 thiamine pyrophosphate binding IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
MF GO:1901681 sulfur compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR000642 Peptidase_M41 428 615
IPR003959 ATPase_AAA_core 216 342
IPR041569 AAA_lid_3 366 406
No external refs found!