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  5. Dusal.2224s00001.1

Dusal.2224s00001.1 (33195745)


Aliases : 33195745

Description : AMP-dependent synthetase/ligase [Interproscan].


Gene families : OG_01_0000081 (OrthoFinder) Phylogenetic Tree(s): OG0000081_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dusal.2224s00001.1
Cluster HCCA: Cluster_144

Target Alias Description ECC score Gene Family Method Actions
Cz01g07080.t1 No alias AMP-binding enzyme, C-terminal domain; AMP-dependent... 0.02 OrthoFinder
Cz12g15140.t1 No alias Thiamine pyrophosphate enzyme, N-terminal TPP-binding... 0.02 OrthoFinder
EOD19511 No alias Putative long-chain-fatty-acid-CoA ligase [Ensembl]. 0.02 OrthoFinder
EOD29518 No alias Putative long-chain-fatty-acid-CoA ligase [Ensembl]. 0.01 OrthoFinder
Transcript_contig_54181 54181 AMP-dependent synthetase/ligase; AMP-binding enzyme,... 0.01 OrthoFinder
Transcript_contig_58430 58430 AMP-dependent synthetase/ligase; AMP-binding enzyme,... 0.01 OrthoFinder
Vocar.0001s0023.1 32885191 AMP-binding enzyme, C-terminal domain; AMP-dependent... 0.02 OrthoFinder
lcl|VRMN01000031.1_cds_KAA8490357.1_5747 KAA8490357 Acyl-CoA synthetase family member 3, mitochondrial 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0004489 methylenetetrahydrofolate reductase (NAD(P)H) activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006555 methionine metabolic process IEP Enrichment
BP GO:0006790 sulfur compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
BP GO:0009066 aspartate family amino acid metabolic process IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Enrichment
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901605 alpha-amino acid metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig 56 142
IPR000873 AMP-dep_Synth/Lig 288 361
No external refs found!