1. Home
  2. Species
  3. Dunaliella sp.
  4. Sequence
  5. Dusal.2138s00001.1

Dusal.2138s00001.1 (33185794)


Aliases : 33185794

Description : Ribosomal protein L27e; KOW [Interproscan].


Gene families : OG_01_0004223 (OrthoFinder) Phylogenetic Tree(s): OG0004223_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dusal.2138s00001.1
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021275.23 tig00021275_g19883.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.23 OrthoFinder
Cre17.g701650 30782062, RPL27 Protein biosynthesis.cytosolic ribosome.large subunit... 0.23 OrthoFinder
Cz04g09100.t1 No alias Ribosomal protein L27e [Interproscan]. 0.15 OrthoFinder
EOD36904 No alias Ribosomal protein L27e [Interproscan]. 0.15 OrthoFinder
OT_05G00120.1 No alias KOW; Ribosomal protein L27e [Interproscan]. 0.15 OrthoFinder
PTI_01G09850.1 No alias Ribosomal protein L27e; KOW [Interproscan]. 0.25 OrthoFinder
Sro245_g097440.1 Contig3087.g24615 60S ribosomal protein L27 0.26 OrthoFinder
SymbC1.scaffold7526.4 7526.4 Ribosomal protein L27e [Interproscan]. 0.02 OrthoFinder
TP15G01980.1 No alias Ribosomal protein L27e [Interproscan]. 0.26 OrthoFinder
Vocar.0004s0217.1 32889937 Ribosomal protein L27e; KOW [Interproscan]. 0.04 OrthoFinder
XM_002504400.1 MICPUN_107054, 107054 Ribosomal protein L27e [Interproscan]. 0.18 OrthoFinder
XM_003059887.1 MicpuC2_34421, 34421 Ribosomal protein L27e [Interproscan]. 0.1 OrthoFinder
lcl|LHPG02000028.1_cds_PRW05844.1_6023 PRW05844 60S ribosomal L27-3-like 0.08 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8495086.1_3616 KAA8495086 60S ribosomal protein L27-B 0.25 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
BP GO:0006720 isoprenoid metabolic process IEP Enrichment
BP GO:0006721 terpenoid metabolic process IEP Enrichment
BP GO:0008299 isoprenoid biosynthetic process IEP Enrichment
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Enrichment
BP GO:0016114 terpenoid biosynthetic process IEP Enrichment
MF GO:0016744 transketolase or transaldolase activity IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
MF GO:0046983 protein dimerization activity IEP Enrichment
InterPro domains Description Start Stop
IPR005824 KOW 7 31
IPR001141 Ribosomal_L27e 52 134
No external refs found!