Dusal.1405s00001.1 (33194454)

Aliases : 33194454

Description : Ribosomal protein L21e [Interproscan].

Gene families : OG_01_0003022 (OrthoFinder) Phylogenetic Tree(s): OG0003022_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: Dusal.1405s00001.1
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000640.5 tig00000640_g2759.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.13 OrthoFinder
Cre06.g278135 30779568, RPL21 Protein biosynthesis.cytosolic ribosome.large subunit... 0.17 OrthoFinder
Cz04g01160.t1 No alias Ribosomal protein L21e [Interproscan]. 0.15 OrthoFinder
EOD15532 No alias Ribosomal protein L21e [Interproscan]. 0.04 OrthoFinder
EOD17730 No alias Ribosomal protein L21e [Interproscan]. 0.04 OrthoFinder
OT_16G01800.1 No alias Ribosomal protein L21e [Interproscan]. 0.08 OrthoFinder
PTI_11G01510.1 No alias Ribosomal protein L21e [Interproscan]. 0.16 OrthoFinder
Sro2397_g326060.1 Contig2368.g19493 60S ribosomal protein L21 0.16 OrthoFinder
TP07G05810.1 No alias Ribosomal protein L21e [Interproscan]. 0.16 OrthoFinder
Vocar.0002s0600.1 32890806 Ribosomal protein L21e [Interproscan]. 0.06 OrthoFinder
XM_002506309.1 MICPUN_95995, 95995 Ribosomal protein L21e [Interproscan]. 0.14 OrthoFinder
XM_003063429.1 MicpuC2_49736, 49736 Ribosomal protein L21e [Interproscan]. 0.08 OrthoFinder
lcl|BLLF01002302.1_cds_GFH23564.1_18041 HaLaN_21192, GFH23564 60S ribosomal protein L21-1 0.02 OrthoFinder
lcl|LHPG02000007.1_cds_PRW57524.1_9173 PRW57524 60S ribosomal L21-1-like 0.07 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499114.1_8067 KAA8499114 60S ribosomal protein L21-A 0.08 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0000347 THO complex IEP Enrichment
CC GO:0000445 THO complex part of transcription export complex IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0004109 coproporphyrinogen oxidase activity IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0006778 porphyrin-containing compound metabolic process IEP Enrichment
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Enrichment
MF GO:0008483 transaminase activity IEP Enrichment
MF GO:0008519 ammonium transmembrane transporter activity IEP Enrichment
BP GO:0015696 ammonium transport IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Enrichment
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
MF GO:0030170 pyridoxal phosphate binding IEP Enrichment
BP GO:0033014 tetrapyrrole biosynthetic process IEP Enrichment
MF GO:0070279 vitamin B6 binding IEP Enrichment
InterPro domains Description Start Stop
IPR001147 Ribosomal_L21e 7 103
No external refs found!