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Aliases : 33196253
Description : Strawberry notch, helicase C domain [Interproscan].
Gene families : OG_01_0000467 (OrthoFinder) Phylogenetic Tree(s): OG0000467_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Dusal.1045s00001.1 | |
| Cluster | HCCA: Cluster_63 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| EOD10242 | No alias | Strawberry notch, AAA domain; Strawberry notch, helicase... | 0.01 | OrthoFinder | |
| EOD31137 | No alias | Strawberry notch, AAA domain; Strawberry notch, helicase... | 0.02 | OrthoFinder | |
| Sro106_g053630.1 | Contig1122.g10760 | Strawberry notch homolog 2 | 0.02 | OrthoFinder | |
| TP02G01100.1 | No alias | Strawberry notch, AAA domain; Strawberry notch, helicase... | 0.02 | OrthoFinder | |
| XM_002507365.1 | MICPUN_77365, 77365 | Strawberry notch, AAA domain; Strawberry notch, helicase... | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Enrichment |
| MF | GO:0003674 | molecular_function | IEP | Enrichment |
| MF | GO:0004112 | cyclic-nucleotide phosphodiesterase activity | IEP | Enrichment |
| MF | GO:0004114 | 3',5'-cyclic-nucleotide phosphodiesterase activity | IEP | Enrichment |
| MF | GO:0004470 | malic enzyme activity | IEP | Enrichment |
| MF | GO:0004471 | malate dehydrogenase (decarboxylating) (NAD+) activity | IEP | Enrichment |
| MF | GO:0004784 | superoxide dismutase activity | IEP | Enrichment |
| MF | GO:0005488 | binding | IEP | Enrichment |
| MF | GO:0005524 | ATP binding | IEP | Enrichment |
| CC | GO:0005694 | chromosome | IEP | Enrichment |
| BP | GO:0006801 | superoxide metabolic process | IEP | Enrichment |
| MF | GO:0008081 | phosphoric diester hydrolase activity | IEP | Enrichment |
| MF | GO:0016209 | antioxidant activity | IEP | Enrichment |
| MF | GO:0016615 | malate dehydrogenase activity | IEP | Enrichment |
| MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | Enrichment |
| MF | GO:0016721 | oxidoreductase activity, acting on superoxide radicals as acceptor | IEP | Enrichment |
| MF | GO:0017076 | purine nucleotide binding | IEP | Enrichment |
| CC | GO:0030117 | membrane coat | IEP | Enrichment |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Enrichment |
| MF | GO:0032553 | ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Enrichment |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Enrichment |
| MF | GO:0036094 | small molecule binding | IEP | Enrichment |
| MF | GO:0043167 | ion binding | IEP | Enrichment |
| MF | GO:0043168 | anion binding | IEP | Enrichment |
| BP | GO:0051276 | chromosome organization | IEP | Enrichment |
| BP | GO:0072593 | reactive oxygen species metabolic process | IEP | Enrichment |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Enrichment |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Enrichment |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR026937 | SBNO_Helicase_C_dom | 193 | 495 |
| No external refs found! |