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  5. Dusal.1024s00003.1

Dusal.1024s00003.1 (33196169)


Aliases : 33196169

Description : BOP1, N-terminal domain; WD40 repeat [Interproscan].


Gene families : OG_01_0003084 (OrthoFinder) Phylogenetic Tree(s): OG0003084_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dusal.1024s00003.1
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000382.38 tig00000382_g24574.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.01 OrthoFinder
Cre10.g417950 30790890 Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 OrthoFinder
Cz12g21250.t1 No alias WD40 repeat; BOP1, N-terminal domain [Interproscan]. 0.02 OrthoFinder
EOD13489 No alias WD40 repeat; BOP1, N-terminal domain [Interproscan]. 0.03 OrthoFinder
PTI_28G01560.1 No alias BOP1, N-terminal domain; WD40 repeat [Interproscan]. 0.04 OrthoFinder
Sro345_g122580.1 Contig2266.g18817 Ribosome biogenesis protein BOP1 0.02 OrthoFinder
Transcript_contig_58163 58163 BOP1, N-terminal domain; WD40 repeat [Interproscan]. 0.01 OrthoFinder
Transcript_contig_82257 82257 WD40 repeat [Interproscan]. 0.01 OrthoFinder
Vocar.0025s0201.1 32898403 WD40 repeat; BOP1, N-terminal domain [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01001331.1_cds_GFH18637.1_13114 HaLaN_15473, GFH18637 Ribosome biogenesis protein BOP1 homolog 0.01 OrthoFinder
lcl|LHPG02000004.1_cds_PRW59011.1_7240 PRW59011 Ribosome biogenesis BOP1-like protein 0.05 OrthoFinder
lcl|VRMN01000008.1_cds_KAA8493052.1_2788 KAA8493052 Ribosome biogenesis protein ERB1 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
BP GO:0006364 rRNA processing IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
MF GO:0008080 N-acetyltransferase activity IEP Enrichment
MF GO:0016407 acetyltransferase activity IEP Enrichment
MF GO:0016410 N-acyltransferase activity IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR012953 BOP1_N_dom 247 510
IPR001680 WD40_repeat 517 548
No external refs found!