Dusal.0936s00001.1 (33189602)

Aliases : 33189602

Description : Ribosomal protein L29/L35 [Interproscan].

Gene families : OG_01_0003855 (OrthoFinder) Phylogenetic Tree(s): OG0003855_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: Dusal.0936s00001.1
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000241.79 tig00000241_g20941.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.08 OrthoFinder
Cre14.g617900 30776584, RPL35 Protein biosynthesis.cytosolic ribosome.large subunit... 0.14 OrthoFinder
Cz12g12300.t1 No alias Ribosomal protein L29/L35 [Interproscan]. 0.1 OrthoFinder
EOD14796 No alias Ribosomal protein L29/L35 [Interproscan]. 0.07 OrthoFinder
OT_05G01490.1 No alias Ribosomal protein L29/L35 [Interproscan]. 0.03 OrthoFinder
PTI_06G01310.1 No alias Ribosomal protein L29/L35 [Interproscan]. 0.1 OrthoFinder
Sro1394_g268940.1 Contig598.g7460 60S ribosomal protein L35 0.11 OrthoFinder
TP12G02050.1 No alias Ribosomal protein L29/L35 [Interproscan]. 0.17 OrthoFinder
Vocar.0001s1458.1 32885943 Ribosomal protein L29/L35 [Interproscan]. 0.04 OrthoFinder
XM_002507650.1 MICPUN_107597, 107597 Ribosomal protein L29/L35 [Interproscan]. 0.07 OrthoFinder
XM_003056132.1 MicpuC2_49485, 49485 60S ribosomal protein L35 (RPL35) 0.1 OrthoFinder
lcl|LHPG02000021.1_cds_PRW20803.1_5002 PRW20803 60S ribosomal L35-like 0.03 OrthoFinder
lcl|VRMN01000009.1_cds_KAA8492667.1_9360 KAA8492667 60S ribosomal protein L35 0.06 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0000347 THO complex IEP Enrichment
CC GO:0000445 THO complex part of transcription export complex IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
InterPro domains Description Start Stop
IPR001854 Ribosomal_L29/L35 12 67
No external refs found!